A therapeutic and epitome resource for Human Papillomaviruses
Predicted highly potential siRNAs (HR-HPVs)
S.No. |
HPV type |
HPV target region |
Start position |
End position |
Sense |
Antisense |
Inhibition (%) |
Off-target (seed) |
1 |
HPV66 |
E7 |
35 |
53 |
tattagaacttgcaccgca |
tgcggtgcaagttctaata |
55.47 |
22 |
2 |
HPV66 |
E7 |
36 |
54 |
attagaacttgcaccgcaa |
ttgcggtgcaagttctaat |
54.71 |
42 |
3 |
HPV66 |
E7 |
37 |
55 |
ttagaacttgcaccgcaaa |
tttgcggtgcaagttctaa |
52.08 |
18 |
4 |
HPV66 |
E7 |
71 |
89 |
aatgcaatgagcaattgga |
tccaattgctcattgcatt |
52.5 |
43 |
5 |
HPV66 |
E7 |
107 |
125 |
atgaggatgaaatagacca |
tggtctatttcatcctcat |
55.23 |
41 |
6 |
HPV66 |
E7 |
108 |
126 |
tgaggatgaaatagaccat |
atggtctatttcatcctca |
54.61 |
47 |
7 |
HPV66 |
E7 |
208 |
226 |
ttggtggtgcagttggaca |
tgtccaactgcaccaccaa |
51.29 |
48 |
8 |
HPV66 |
E7 |
220 |
238 |
ttggacattcagagtacca |
tggtactctgaatgtccaa |
57.43 |
39 |
9 |
HPV66 |
E7 |
236 |
254 |
ccaaagaggagctacgtgt |
acacgtagctcctctttgg |
50.58 |
27 |
10 |
HPV66 |
E7 |
245 |
263 |
agctacgtgtggtacaaca |
tgttgtaccacacgtagct |
50.16 |
31 |
11 |
HPV66 |
E7 |
291 |
309 |
gtgcccactctgcgcatca |
tgatgcgcagagtgggcac |
50.09 |
22 |
12 |
HPV73 |
E7 |
130 |
148 |
agacaagctgaacgagagt |
actctcgttcagcttgtct |
50.89 |
18 |
13 |
HPV73 |
E7 |
157 |
175 |
atagttactgactgcacga |
tcgtgcagtcagtaactat |
50.41 |
44 |
14 |
HPV73 |
E7 |
160 |
178 |
gttactgactgcacgaagt |
acttcgtgcagtcagtaac |
51.78 |
42 |
15 |
HPV73 |
E7 |
179 |
197 |
gtcagtgcacagtatgcct |
aggcatactgtgcactgac |
52.65 |
37 |
16 |
HPV73 |
E7 |
239 |
257 |
agttgcttatgggtacact |
agtgtacccataagcaact |
50.25 |
30 |
17 |
HPV73 |
E7 |
240 |
258 |
gttgcttatgggtacacta |
tagtgtacccataagcaac |
56.11 |
35 |
18 |
HPV58 |
E7 |
125 |
143 |
cagatggacaagcacaacc |
ggttgtgcttgtccatctg |
53.9 |
48 |
19 |
HPV58 |
E7 |
209 |
227 |
tcaacagtacaacaaccga |
tcggttgttgtactgttga |
50.04 |
9 |
20 |
HPV58 |
E7 |
265 |
283 |
accattgtgtgccctagct |
agctagggcacacaatggt |
54.56 |
44 |
21 |
HPV16 |
E7 |
105 |
123 |
ggatgaaatagatggtcca |
tggaccatctatttcatcc |
58.04 |
35 |
22 |
HPV16 |
E7 |
174 |
192 |
ttgcaagtgtgactctacg |
cgtagagtcacacttgcaa |
52.93 |
47 |
23 |
HPV16 |
E7 |
176 |
194 |
gcaagtgtgactctacgct |
agcgtagagtcacacttgc |
53.53 |
23 |
24 |
HPV16 |
E7 |
177 |
195 |
caagtgtgactctacgctt |
aagcgtagagtcacacttg |
50.16 |
20 |
25 |
HPV16 |
E7 |
181 |
199 |
tgtgactctacgcttcggt |
accgaagcgtagagtcaca |
50.09 |
44 |
26 |
HPV16 |
E7 |
182 |
200 |
gtgactctacgcttcggtt |
aaccgaagcgtagagtcac |
50.05 |
25 |
27 |
HPV16 |
E7 |
192 |
210 |
gcttcggttgtgcgtacaa |
ttgtacgcacaaccgaagc |
51.32 |
8 |
28 |
HPV16 |
E7 |
213 |
231 |
cacacacgtagacattcgt |
acgaatgtctacgtgtgtg |
50.01 |
5 |
29 |
HPV16 |
E7 |
214 |
232 |
acacacgtagacattcgta |
tacgaatgtctacgtgtgt |
51.79 |
13 |
30 |
HPV16 |
E7 |
238 |
256 |
gaagacctgttaatgggca |
tgcccattaacaggtcttc |
56.88 |
50 |
31 |
HPV16 |
E7 |
246 |
264 |
gttaatgggcacactagga |
tcctagtgtgcccattaac |
51.7 |
50 |
32 |
HPV31 |
E7 |
8 |
26 |
gagaaacacctacgttgca |
tgcaacgtaggtgtttctc |
55.98 |
30 |
33 |
HPV31 |
E7 |
9 |
27 |
agaaacacctacgttgcaa |
ttgcaacgtaggtgtttct |
53.6 |
30 |
34 |
HPV31 |
E7 |
60 |
78 |
tgacctccactgttatgag |
ctcataacagtggaggtca |
52.31 |
50 |
35 |
HPV31 |
E7 |
73 |
91 |
tatgagcaattacccgaca |
tgtcgggtaattgctcata |
50.1 |
12 |
36 |
HPV31 |
E7 |
98 |
116 |
atgaggaggatgtcataga |
tctatgacatcctcctcat |
57.56 |
48 |
37 |
HPV31 |
E7 |
100 |
118 |
gaggaggatgtcatagaca |
tgtctatgacatcctcctc |
53.92 |
35 |
38 |
HPV31 |
E7 |
129 |
147 |
acaagcagaaccggacaca |
tgtgtccggttctgcttgt |
50.32 |
34 |
39 |
HPV31 |
E7 |
214 |
232 |
acacaagtagatattcgca |
tgcgaatatctacttgtgt |
51.44 |
5 |
40 |
HPV31 |
E7 |
238 |
256 |
caagagctgttaatgggct |
agcccattaacagctcttg |
50.79 |
50 |
41 |
HPV31 |
E7 |
252 |
270 |
gggctcatttggaatcgtg |
cacgattccaaatgagccc |
52.81 |
3 |
42 |
HPV31 |
E7 |
253 |
271 |
ggctcatttggaatcgtgt |
acacgattccaaatgagcc |
52.48 |
10 |
43 |
HPV31 |
E7 |
254 |
272 |
gctcatttggaatcgtgtg |
cacacgattccaaatgagc |
50.46 |
23 |
44 |
HPV33 |
E7 |
52 |
70 |
gaaccaactgacctatact |
agtataggtcagttggttc |
56.15 |
32 |
45 |
HPV33 |
E7 |
122 |
140 |
cagatggacaagcacaacc |
ggttgtgcttgtccatctg |
53.9 |
48 |
46 |
HPV33 |
E7 |
212 |
230 |
gtacagcaagtgacctacg |
cgtaggtcacttgctgtac |
50.52 |
45 |
47 |
HPV33 |
E7 |
214 |
232 |
acagcaagtgacctacgaa |
ttcgtaggtcacttgctgt |
57.74 |
7 |
48 |
HPV33 |
E7 |
215 |
233 |
cagcaagtgacctacgaac |
gttcgtaggtcacttgctg |
53.14 |
10 |
49 |
HPV33 |
E7 |
217 |
235 |
gcaagtgacctacgaacca |
tggttcgtaggtcacttgc |
54.3 |
13 |
50 |
HPV33 |
E7 |
218 |
236 |
caagtgacctacgaaccat |
atggttcgtaggtcacttg |
56.88 |
13 |
51 |
HPV33 |
E7 |
229 |
247 |
cgaaccatacagcaactac |
gtagttgctgtatggttcg |
56.36 |
39 |
52 |
HPV33 |
E7 |
238 |
256 |
cagcaactacttatgggca |
tgcccataagtagttgctg |
53.66 |
46 |
53 |
HPV33 |
E7 |
261 |
279 |
gaatattgtgtgccctacc |
ggtagggcacacaatattc |
52.77 |
35 |
54 |
HPV51 |
E7 |
2 |
20 |
tgcgtggtaatgtaccaca |
tgtggtacattaccacgca |
50.27 |
50 |
55 |
HPV51 |
E7 |
65 |
83 |
acttgcaatgctacgagca |
tgctcgtagcattgcaagt |
51.24 |
7 |
56 |
HPV51 |
E7 |
66 |
84 |
cttgcaatgctacgagcaa |
ttgctcgtagcattgcaag |
51.44 |
22 |
57 |
HPV51 |
E7 |
120 |
138 |
tatgcgtgaccagctacca |
tggtagctggtcacgcata |
52.21 |
47 |
58 |
HPV51 |
E7 |
129 |
147 |
ccagctaccagaaagacgg |
ccgtctttctggtagctgg |
55.03 |
44 |
59 |
HPV51 |
E7 |
148 |
166 |
gctggacaggctacgtgtt |
aacacgtagcctgtccagc |
54.14 |
31 |
60 |
HPV51 |
E7 |
149 |
167 |
ctggacaggctacgtgtta |
taacacgtagcctgtccag |
56.16 |
26 |
61 |
HPV51 |
E7 |
166 |
184 |
tacagaattgaagctccgt |
acggagcttcaattctgta |
51.8 |
35 |
62 |
HPV51 |
E7 |
167 |
185 |
acagaattgaagctccgtg |
cacggagcttcaattctgt |
53.75 |
22 |
63 |
HPV51 |
E7 |
168 |
186 |
cagaattgaagctccgtgt |
acacggagcttcaattctg |
54 |
36 |
64 |
HPV51 |
E7 |
169 |
187 |
agaattgaagctccgtgtt |
aacacggagcttcaattct |
51.97 |
25 |
65 |
HPV51 |
E7 |
170 |
188 |
gaattgaagctccgtgttg |
caacacggagcttcaattc |
55.2 |
42 |
66 |
HPV51 |
E7 |
171 |
189 |
aattgaagctccgtgttgc |
gcaacacggagcttcaatt |
51.73 |
35 |
67 |
HPV51 |
E7 |
189 |
207 |
caggtgttcaagtgtagta |
tactacacttgaacacctg |
54.24 |
46 |
68 |
HPV51 |
E7 |
191 |
209 |
ggtgttcaagtgtagtaca |
tgtactacacttgaacacc |
53.15 |
20 |
69 |
HPV51 |
E7 |
231 |
249 |
agacacccttcgcgttgta |
tacaacgcgaagggtgtct |
52.41 |
9 |
70 |
HPV51 |
E7 |
233 |
251 |
acacccttcgcgttgtaca |
tgtacaacgcgaagggtgt |
50.25 |
49 |
71 |
HPV51 |
E7 |
250 |
268 |
cagcagatgttaatgggcg |
cgcccattaacatctgctg |
52.85 |
50 |
72 |
HPV51 |
E7 |
251 |
269 |
agcagatgttaatgggcga |
tcgcccattaacatctgct |
56.46 |
27 |
73 |
HPV51 |
E7 |
252 |
270 |
gcagatgttaatgggcgaa |
ttcgcccattaacatctgc |
57.74 |
46 |
74 |
HPV51 |
E7 |
255 |
273 |
gatgttaatgggcgaacta |
tagttcgcccattaacatc |
50.07 |
26 |
75 |
HPV51 |
E7 |
273 |
291 |
aagcctggtttgcccgtgt |
acacgggcaaaccaggctt |
50.53 |
36 |
76 |
HPV51 |
E7 |
274 |
292 |
agcctggtttgcccgtgtt |
aacacgggcaaaccaggct |
51.96 |
49 |
77 |
HPV51 |
E7 |
275 |
293 |
gcctggtttgcccgtgttg |
caacacgggcaaaccaggc |
51.24 |
42 |
78 |
HPV51 |
E7 |
276 |
294 |
cctggtttgcccgtgttgt |
acaacacgggcaaaccagg |
52.47 |
35 |
79 |
HPV51 |
E7 |
279 |
297 |
ggtttgcccgtgttgtgcg |
cgcacaacacgggcaaacc |
50 |
44 |
80 |
HPV51 |
E7 |
280 |
298 |
gtttgcccgtgttgtgcga |
tcgcacaacacgggcaaac |
50.2 |
19 |
81 |
HPV39 |
E7 |
68 |
86 |
cggttgaccttgtatgtca |
tgacatacaaggtcaaccg |
62.08 |
50 |
82 |
HPV39 |
E7 |
71 |
89 |
ttgaccttgtatgtcacga |
tcgtgacatacaaggtcaa |
53.74 |
18 |
83 |
HPV39 |
E7 |
72 |
90 |
tgaccttgtatgtcacgag |
ctcgtgacatacaaggtca |
55.24 |
8 |
84 |
HPV39 |
E7 |
73 |
91 |
gaccttgtatgtcacgagc |
gctcgtgacatacaaggtc |
59.85 |
43 |
85 |
HPV39 |
E7 |
74 |
92 |
accttgtatgtcacgagca |
tgctcgtgacatacaaggt |
57.17 |
23 |
86 |
HPV39 |
E7 |
75 |
93 |
ccttgtatgtcacgagcaa |
ttgctcgtgacatacaagg |
59.01 |
22 |
87 |
HPV39 |
E7 |
76 |
94 |
cttgtatgtcacgagcaat |
attgctcgtgacatacaag |
55.14 |
14 |
88 |
HPV39 |
E7 |
113 |
131 |
aaatagatgaacccgacca |
tggtcgggttcatctattt |
50.05 |
30 |
89 |
HPV39 |
E7 |
115 |
133 |
atagatgaacccgaccatg |
catggtcgggttcatctat |
52.02 |
10 |
90 |
HPV39 |
E7 |
125 |
143 |
ccgaccatgcagttaatca |
tgattaactgcatggtcgg |
53.2 |
46 |
91 |
HPV39 |
E7 |
143 |
161 |
accaacatcaactactagc |
gctagtagttgatgttggt |
51.55 |
36 |
92 |
HPV39 |
E7 |
150 |
168 |
tcaactactagccagacgg |
ccgtctggctagtagttga |
52.23 |
31 |
93 |
HPV39 |
E7 |
153 |
171 |
actactagccagacgggat |
atcccgtctggctagtagt |
50.34 |
30 |
94 |
HPV39 |
E7 |
154 |
172 |
ctactagccagacgggatg |
catcccgtctggctagtag |
53.07 |
15 |
95 |
HPV39 |
E7 |
235 |
253 |
gtagaagcctcacgggata |
tatcccgtgaggcttctac |
54.89 |
15 |
96 |
HPV39 |
E7 |
248 |
266 |
gggatactctgcgacaact |
agttgtcgcagagtatccc |
50.21 |
23 |
97 |
HPV39 |
E7 |
276 |
294 |
gtttatggactcactagga |
tcctagtgagtccataaac |
52.72 |
50 |
98 |
HPV35 |
E7 |
3 |
21 |
gcatggagaaataactaca |
tgtagttatttctccatgc |
52.03 |
48 |
99 |
HPV35 |
E7 |
52 |
70 |
gaggcaactgacctatact |
agtataggtcagttgcctc |
60.27 |
32 |
100 |
HPV35 |
E7 |
53 |
71 |
aggcaactgacctatactg |
cagtataggtcagttgcct |
53.46 |
47 |
101 |
HPV35 |
E7 |
108 |
126 |
agatactattgacggtcca |
tggaccgtcaatagtatct |
53.28 |
16 |
102 |
HPV35 |
E7 |
109 |
127 |
gatactattgacggtccag |
ctggaccgtcaatagtatc |
50.3 |
20 |
103 |
HPV35 |
E7 |
175 |
193 |
tgttgtaaatgtgaggcga |
tcgcctcacatttacaaca |
52.75 |
25 |
104 |
HPV35 |
E7 |
176 |
194 |
gttgtaaatgtgaggcgac |
gtcgcctcacatttacaac |
54.82 |
21 |
105 |
HPV35 |
E7 |
177 |
195 |
ttgtaaatgtgaggcgaca |
tgtcgcctcacatttacaa |
55.2 |
9 |
106 |
HPV35 |
E7 |
179 |
197 |
gtaaatgtgaggcgacact |
agtgtcgcctcacatttac |
53.88 |
16 |
107 |
HPV35 |
E7 |
282 |
300 |
ctgttcacagagagcataa |
ttatgctctctgtgaacag |
56.45 |
43 |
108 |
HPV45 |
E7 |
73 |
91 |
gacctgttgtgttacgagc |
gctcgtaacacaacaggtc |
51.25 |
10 |
109 |
HPV45 |
E7 |
75 |
93 |
cctgttgtgttacgagcaa |
ttgctcgtaacacaacagg |
53.46 |
22 |
110 |
HPV45 |
E7 |
120 |
138 |
tgaagcagatggagttagt |
actaactccatctgcttca |
57.68 |
44 |
111 |
HPV45 |
E7 |
121 |
139 |
gaagcagatggagttagtc |
gactaactccatctgcttc |
59.03 |
37 |
112 |
HPV45 |
E7 |
122 |
140 |
aagcagatggagttagtca |
tgactaactccatctgctt |
54.62 |
15 |
113 |
HPV45 |
E7 |
126 |
144 |
agatggagttagtcatgca |
tgcatgactaactccatct |
57.59 |
45 |
114 |
HPV45 |
E7 |
131 |
149 |
gagttagtcatgcacaact |
agttgtgcatgactaactc |
54.96 |
48 |
115 |
HPV45 |
E7 |
165 |
183 |
cgaaccacagcgtcacaaa |
tttgtgacgctgtggttcg |
50.61 |
50 |
116 |
HPV45 |
E7 |
195 |
213 |
atgttgtaagtgtgacggc |
gccgtcacacttacaacat |
50.75 |
19 |
117 |
HPV45 |
E7 |
196 |
214 |
tgttgtaagtgtgacggca |
tgccgtcacacttacaaca |
52.08 |
19 |
118 |
HPV45 |
E7 |
197 |
215 |
gttgtaagtgtgacggcag |
ctgccgtcacacttacaac |
51.02 |
30 |
119 |
HPV45 |
E7 |
198 |
216 |
ttgtaagtgtgacggcaga |
tctgccgtcacacttacaa |
58.43 |
40 |
120 |
HPV45 |
E7 |
199 |
217 |
tgtaagtgtgacggcagaa |
ttctgccgtcacacttaca |
50.24 |
34 |
121 |
HPV45 |
E7 |
296 |
314 |
gtccgtggtgtgcaactaa |
ttagttgcacaccacggac |
54.13 |
39 |
122 |
HPV45 |
E7 |
299 |
317 |
cgtggtgtgcaactaacca |
tggttagttgcacaccacg |
50.66 |
30 |
123 |
HPV45 |
E7 |
300 |
318 |
gtggtgtgcaactaaccaa |
ttggttagttgcacaccac |
50.74 |
48 |
124 |
HPV52 |
E7 |
5 |
23 |
gtggagacaaagcaactat |
atagttgctttgtctccac |
55.43 |
39 |
125 |
HPV52 |
E7 |
68 |
86 |
actgctatgagcaattagg |
cctaattgctcatagcagt |
52.67 |
50 |
126 |
HPV52 |
E7 |
109 |
127 |
acagatggtgtggaccggc |
gccggtccacaccatctgt |
52.48 |
29 |
127 |
HPV52 |
E7 |
111 |
129 |
agatggtgtggaccggcca |
tggccggtccacaccatct |
54.02 |
14 |
128 |
HPV52 |
E7 |
188 |
206 |
gtgatagcacactacggct |
agccgtagtgtgctatcac |
52.38 |
14 |
129 |
HPV52 |
E7 |
190 |
208 |
gatagcacactacggctat |
atagccgtagtgtgctatc |
51.02 |
18 |
130 |
HPV52 |
E7 |
191 |
209 |
atagcacactacggctatg |
catagccgtagtgtgctat |
52.26 |
12 |
131 |
HPV52 |
E7 |
193 |
211 |
agcacactacggctatgca |
tgcatagccgtagtgtgct |
50.92 |
29 |
132 |
HPV52 |
E7 |
202 |
220 |
cggctatgcattcatagca |
tgctatgaatgcatagccg |
54.94 |
50 |
133 |
HPV52 |
E7 |
209 |
227 |
gcattcatagcactgcgac |
gtcgcagtgctatgaatgc |
57.32 |
19 |
134 |
HPV52 |
E7 |
210 |
228 |
cattcatagcactgcgacg |
cgtcgcagtgctatgaatg |
54.08 |
19 |
135 |
HPV56 |
E7 |
18 |
36 |
aacgctgcaagacgttgta |
tacaacgtcttgcagcgtt |
50.19 |
9 |
136 |
HPV56 |
E7 |
19 |
37 |
acgctgcaagacgttgtat |
atacaacgtcttgcagcgt |
50.82 |
15 |
137 |
HPV56 |
E7 |
33 |
51 |
tgtattagaactaacacct |
aggtgttagttctaataca |
50.4 |
35 |
138 |
HPV56 |
E7 |
71 |
89 |
agtgcaatgagcaattgga |
tccaattgctcattgcact |
61.84 |
43 |
139 |
HPV56 |
E7 |
106 |
124 |
gatgaggatgaagtagacc |
ggtctacttcatcctcatc |
54.77 |
40 |
140 |
HPV56 |
E7 |
107 |
125 |
atgaggatgaagtagacca |
tggtctacttcatcctcat |
58.28 |
24 |
141 |
HPV56 |
E7 |
108 |
126 |
tgaggatgaagtagaccat |
atggtctacttcatcctca |
61.11 |
47 |
142 |
HPV56 |
E7 |
208 |
226 |
tttgtggtgcagttggaca |
tgtccaactgcaccacaaa |
53.35 |
48 |
143 |
HPV56 |
E7 |
220 |
238 |
ttggacattcagagtacca |
tggtactctgaatgtccaa |
57.43 |
39 |
144 |
HPV56 |
E7 |
239 |
257 |
aagaggacctgcgtgttgt |
acaacacgcaggtcctctt |
52.19 |
35 |
145 |
HPV56 |
E7 |
242 |
260 |
aggacctgcgtgttgtaca |
tgtacaacacgcaggtcct |
57.74 |
49 |
146 |
HPV56 |
E7 |
245 |
263 |
acctgcgtgttgtacaaca |
tgttgtacaacacgcaggt |
53.71 |
31 |
147 |
HPV56 |
E7 |
291 |
309 |
gtgcccactctgcgcatca |
tgatgcgcagagtgggcac |
50.09 |
22 |
148 |
HPV59 |
E7 |
69 |
87 |
tgaccttgtgtgctacgag |
ctcgtagcacacaaggtca |
51.16 |
7 |
149 |
HPV59 |
E7 |
70 |
88 |
gaccttgtgtgctacgagc |
gctcgtagcacacaaggtc |
56.33 |
10 |
150 |
HPV59 |
E7 |
71 |
89 |
accttgtgtgctacgagca |
tgctcgtagcacacaaggt |
52.1 |
7 |
151 |
HPV59 |
E7 |
72 |
90 |
ccttgtgtgctacgagcaa |
ttgctcgtagcacacaagg |
56.91 |
22 |
152 |
HPV59 |
E7 |
73 |
91 |
cttgtgtgctacgagcaat |
attgctcgtagcacacaag |
54.42 |
14 |
153 |
HPV59 |
E7 |
86 |
104 |
agcaattacctgactccga |
tcggagtcaggtaattgct |
52.58 |
37 |
154 |
HPV59 |
E7 |
87 |
105 |
gcaattacctgactccgac |
gtcggagtcaggtaattgc |
52.72 |
18 |
155 |
HPV59 |
E7 |
146 |
164 |
ctttgctactagctagacg |
cgtctagctagtagcaaag |
50.19 |
31 |
156 |
HPV59 |
E7 |
168 |
186 |
tgaaccacagcgtcacaac |
gttgtgacgctgtggttca |
51.32 |
50 |
157 |
HPV59 |
E7 |
215 |
233 |
atcaacttcagctagtagt |
actactagctgaagttgat |
50.59 |
36 |
158 |
HPV59 |
E7 |
230 |
248 |
tagtagaaacctcgcaaga |
tcttgcgaggtttctacta |
50.99 |
5 |
159 |
HPV18 |
E7 |
65 |
83 |
cggttgaccttctatgtca |
tgacatagaaggtcaaccg |
53.75 |
50 |
160 |
HPV18 |
E7 |
70 |
88 |
gaccttctatgtcacgagc |
gctcgtgacatagaaggtc |
50.95 |
43 |
161 |
HPV18 |
E7 |
84 |
102 |
cgagcaattaagcgactca |
tgagtcgcttaattgctcg |
52.07 |
18 |
162 |
HPV18 |
E7 |
85 |
103 |
gagcaattaagcgactcag |
ctgagtcgcttaattgctc |
50.27 |
18 |
163 |
HPV18 |
E7 |
101 |
119 |
cagaggaagaaaacgatga |
tcatcgttttcttcctctg |
52.84 |
20 |
164 |
HPV18 |
E7 |
102 |
120 |
agaggaagaaaacgatgaa |
ttcatcgttttcttcctct |
54.36 |
30 |
165 |
HPV18 |
E7 |
103 |
121 |
gaggaagaaaacgatgaaa |
tttcatcgttttcttcctc |
52.75 |
26 |
166 |
HPV18 |
E7 |
161 |
179 |
ccgaaccacaacgtcacac |
gtgtgacgttgtggttcgg |
50.36 |
17 |
167 |
HPV18 |
E7 |
208 |
226 |
gccagaattgagctagtag |
ctactagctcaattctggc |
54.04 |
37 |
168 |
HPV18 |
E7 |
209 |
227 |
ccagaattgagctagtagt |
actactagctcaattctgg |
56.94 |
36 |
169 |
HPV18 |
E7 |
227 |
245 |
tagaaagctcagcagacga |
tcgtctgctgagctttcta |
54.17 |
21 |
170 |
HPV18 |
E7 |
231 |
249 |
aagctcagcagacgacctt |
aaggtcgtctgctgagctt |
51.82 |
30 |
171 |
HPV18 |
E7 |
239 |
257 |
cagacgaccttcgagcatt |
aatgctcgaaggtcgtctg |
53.31 |
17 |
172 |
HPV82 |
E7 |
2 |
20 |
tgcgtggtaatgtaccaca |
tgtggtacattaccacgca |
50.27 |
50 |
173 |
HPV82 |
E7 |
65 |
83 |
acttgcaatgctacgagca |
tgctcgtagcattgcaagt |
51.24 |
7 |
174 |
HPV82 |
E7 |
66 |
84 |
cttgcaatgctacgagcaa |
ttgctcgtagcattgcaag |
51.44 |
22 |
175 |
HPV82 |
E7 |
142 |
160 |
caagctggacaggatacgt |
acgtatcctgtccagcttg |
51.31 |
10 |
176 |
HPV82 |
E7 |
144 |
162 |
agctggacaggatacgtgt |
acacgtatcctgtccagct |
50.15 |
22 |
177 |
HPV82 |
E7 |
145 |
163 |
gctggacaggatacgtgtt |
aacacgtatcctgtccagc |
53.02 |
31 |
178 |
HPV82 |
E7 |
146 |
164 |
ctggacaggatacgtgtta |
taacacgtatcctgtccag |
52.37 |
26 |
179 |
HPV82 |
E7 |
178 |
196 |
cactgttgcaggtgttcga |
tcgaacacctgcaacagtg |
55.93 |
19 |
180 |
HPV82 |
E7 |
179 |
197 |
actgttgcaggtgttcgag |
ctcgaacacctgcaacagt |
55.72 |
9 |
181 |
HPV82 |
E7 |
180 |
198 |
ctgttgcaggtgttcgagt |
actcgaacacctgcaacag |
55.72 |
37 |
182 |
HPV82 |
E7 |
181 |
199 |
tgttgcaggtgttcgagtg |
cactcgaacacctgcaaca |
51.95 |
21 |
183 |
HPV82 |
E7 |
182 |
200 |
gttgcaggtgttcgagtgt |
acactcgaacacctgcaac |
53.03 |
14 |
184 |
HPV82 |
E7 |
188 |
206 |
ggtgttcgagtgttgtaca |
tgtacaacactcgaacacc |
53.71 |
49 |
185 |
HPV82 |
E7 |
195 |
213 |
gagtgttgtacagctcgca |
tgcgagctgtacaacactc |
61.26 |
21 |
186 |
HPV82 |
E7 |
196 |
214 |
agtgttgtacagctcgcag |
ctgcgagctgtacaacact |
53.26 |
23 |
187 |
HPV82 |
E7 |
197 |
215 |
gtgttgtacagctcgcagt |
actgcgagctgtacaacac |
57.17 |
25 |
188 |
HPV82 |
E7 |
198 |
216 |
tgttgtacagctcgcagtg |
cactgcgagctgtacaaca |
53.89 |
18 |
189 |
HPV82 |
E7 |
199 |
217 |
gttgtacagctcgcagtgg |
ccactgcgagctgtacaac |
51.83 |
42 |
190 |
HPV82 |
E7 |
223 |
241 |
agtggagacagccttcgca |
tgcgaaggctgtctccact |
51.83 |
20 |
191 |
HPV82 |
E7 |
224 |
242 |
gtggagacagccttcgcat |
atgcgaaggctgtctccac |
52.33 |
16 |
192 |
HPV82 |
E7 |
226 |
244 |
ggagacagccttcgcatat |
atatgcgaaggctgtctcc |
50.64 |
2 |
193 |
HPV82 |
E7 |
227 |
245 |
gagacagccttcgcatatt |
aatatgcgaaggctgtctc |
55.22 |
3 |
194 |
HPV82 |
E7 |
252 |
270 |
aatgttactgggcgaccta |
taggtcgcccagtaacatt |
53.37 |
11 |
195 |
HPV82 |
E7 |
253 |
271 |
atgttactgggcgacctaa |
ttaggtcgcccagtaacat |
52.02 |
15 |
196 |
HPV68 |
E7 |
32 |
50 |
ttgtgttagagctatgtcc |
ggacatagctctaacacaa |
51.58 |
50 |
197 |
HPV68 |
E7 |
36 |
54 |
gttagagctatgtccatac |
gtatggacatagctctaac |
52.14 |
43 |
198 |
HPV68 |
E7 |
68 |
86 |
cggttgaccttgtatgtca |
tgacatacaaggtcaaccg |
62.08 |
50 |
199 |
HPV68 |
E7 |
71 |
89 |
ttgaccttgtatgtcacga |
tcgtgacatacaaggtcaa |
53.74 |
18 |
200 |
HPV68 |
E7 |
72 |
90 |
tgaccttgtatgtcacgag |
ctcgtgacatacaaggtca |
55.24 |
8 |
201 |
HPV68 |
E7 |
73 |
91 |
gaccttgtatgtcacgagc |
gctcgtgacatacaaggtc |
59.85 |
43 |
202 |
HPV68 |
E7 |
74 |
92 |
accttgtatgtcacgagca |
tgctcgtgacatacaaggt |
57.17 |
23 |
203 |
HPV68 |
E7 |
75 |
93 |
ccttgtatgtcacgagcaa |
ttgctcgtgacatacaagg |
59.01 |
22 |
204 |
HPV68 |
E7 |
76 |
94 |
cttgtatgtcacgagcaat |
attgctcgtgacatacaag |
55.14 |
14 |
205 |
HPV68 |
E7 |
94 |
112 |
ttaggagattcagacgatg |
catcgtctgaatctcctaa |
50.16 |
11 |
206 |
HPV68 |
E7 |
95 |
113 |
taggagattcagacgatga |
tcatcgtctgaatctccta |
52.9 |
18 |
207 |
HPV68 |
E7 |
96 |
114 |
aggagattcagacgatgaa |
ttcatcgtctgaatctcct |
51.58 |
30 |
208 |
HPV68 |
E7 |
97 |
115 |
ggagattcagacgatgaaa |
tttcatcgtctgaatctcc |
54.67 |
26 |
209 |
HPV68 |
E7 |
113 |
131 |
aaatagatgaacccgacca |
tggtcgggttcatctattt |
50.05 |
30 |
210 |
HPV68 |
E7 |
115 |
133 |
atagatgaacccgaccatg |
catggtcgggttcatctat |
52.02 |
10 |
211 |
HPV68 |
E7 |
125 |
143 |
ccgaccatgcagttaatca |
tgattaactgcatggtcgg |
53.2 |
46 |
212 |
HPV68 |
E7 |
217 |
235 |
aacaaggcactgcaactag |
ctagttgcagtgccttgtt |
51.08 |
39 |
213 |
HPV68 |
E7 |
218 |
236 |
acaaggcactgcaactagt |
actagttgcagtgccttgt |
55.28 |
40 |
214 |
HPV68 |
E7 |
221 |
239 |
aggcactgcaactagtagt |
actactagttgcagtgcct |
52.73 |
36 |
215 |
HPV26 |
E7 |
34 |
52 |
atactagatctggtgccgc |
gcggcaccagatctagtat |
53.68 |
37 |
216 |
HPV26 |
E7 |
35 |
53 |
tactagatctggtgccgca |
tgcggcaccagatctagta |
50.93 |
29 |
217 |
HPV26 |
E7 |
36 |
54 |
actagatctggtgccgcaa |
ttgcggcaccagatctagt |
50.69 |
13 |
218 |
HPV26 |
E7 |
59 |
77 |
aaattgacctacgctgcta |
tagcagcgtaggtcaattt |
51.46 |
47 |
219 |
HPV26 |
E7 |
71 |
89 |
gctgctacgaacaattgga |
tccaattgttcgtagcagc |
53.98 |
43 |
220 |
HPV26 |
E7 |
263 |
281 |
agatgttaatggaagacgt |
acgtcttccattaacatct |
53.76 |
41 |
221 |
HPV26 |
E7 |
264 |
282 |
gatgttaatggaagacgtg |
cacgtcttccattaacatc |
56.61 |
34 |
222 |
HPV26 |
E7 |
265 |
283 |
atgttaatggaagacgtgt |
acacgtcttccattaacat |
50.6 |
24 |
223 |
HPV26 |
E7 |
267 |
285 |
gttaatggaagacgtgtcc |
ggacacgtcttccattaac |
52.41 |
25 |
224 |
HPV53 |
E7 |
106 |
124 |
gatgaggatgaagtagacc |
ggtctacttcatcctcatc |
54.77 |
40 |
225 |
HPV53 |
E7 |
107 |
125 |
atgaggatgaagtagacca |
tggtctacttcatcctcat |
58.28 |
24 |
226 |
HPV53 |
E7 |
108 |
126 |
tgaggatgaagtagaccat |
atggtctacttcatcctca |
61.11 |
47 |
227 |
HPV53 |
E7 |
194 |
212 |
gttgtaggtgtgagtcgtt |
aacgactcacacctacaac |
51.39 |
28 |
228 |
HPV53 |
E7 |
196 |
214 |
tgtaggtgtgagtcgttgg |
ccaacgactcacacctaca |
50.53 |
10 |
229 |
HPV53 |
E7 |
197 |
215 |
gtaggtgtgagtcgttggt |
accaacgactcacacctac |
51.68 |
11 |
230 |
HPV53 |
E7 |
222 |
240 |
ggctgttcagagttcaaca |
tgttgaactctgaacagcc |
54.64 |
39 |