HPVomics

Efficient putative LR-HPVs E7 protein epitopes (MHC-I Binders)

S.No.	HPV type	Target region	Peptide seuences	Start	End	Length	Allele	Percentile rank	ann_ic50	smm_ic50
1	HPV6	E7	GTLNIVCPI	85	93	9	HLA-A*32:01	0.3	9.59	26.24
2	HPV6	E7	IVCPICAPK	89	97	9	HLA-A*11:01	0.35	21.42	33.37
3	HPV6	E7	NIVCPICAPK	88	97	10	HLA-A*68:01	0.4	30.47	15.38
4	HPV6	E7	LLLGTLNIV	82	90	9	HLA-A*02:01	0.6	25.78	30.77
5	HPV6	E7	LLLGTLNIV	82	90	9	HLA-A*02:03	0.7	11.96	24.54
6	HPV6	E7	LLLGTLNIV	82	90	9	HLA-A*02:06	0.75	14.78	31.44
7	HPV6	E7	GLHCYEQLV	22	30	9	HLA-A*02:03	0.85	24.83	29.71
8	HPV11	E7	GTLNIVCPI	85	93	9	HLA-A*32:01	0.3	9.59	26.24
9	HPV11	E7	IVCPICAPK	89	97	9	HLA-A*11:01	0.35	21.42	33.37
10	HPV11	E7	NIVCPICAPK	88	97	10	HLA-A*68:01	0.4	30.47	15.38
11	HPV11	E7	LLLGTLNIV	82	90	9	HLA-A*02:01	0.6	25.78	30.77
12	HPV11	E7	LLLGTLNIV	82	90	9	HLA-A*02:03	0.7	11.96	24.54
13	HPV11	E7	LLLGTLNIV	82	90	9	HLA-A*02:06	0.75	14.78	31.44
14	HPV40	E7	LLMGTLHIV	95	103	9	HLA-A*02:01	0.2	5.5	6.1
15	HPV40	E7	LLMGTLHIV	95	103	9	HLA-A*02:03	0.2	2.69	2.53
16	HPV40	E7	RPTLGDIVL	5	13	9	HLA-B*07:02	0.2	21.2	24.6
17	HPV40	E7	LLMGTLHIV	95	103	9	HLA-A*02:06	0.25	9.11	9.5
18	HPV40	E7	QLLMGTLHIV	94	103	10	HLA-A*02:01	0.4	24.18	34.31
19	HPV40	E7	VLNLHPEPV	12	20	9	HLA-A*02:03	0.4	7.56	9.86
20	HPV40	E7	CVFCQCLVR	71	79	9	HLA-A*68:01	0.45	35.3	22.83
21	HPV40	E7	QLLMGTLHIV	94	103	10	HLA-A*02:03	0.5	10.81	26.32
22	HPV42	E7	MLLGTLDIV	77	85	9	HLA-A*02:06	0.4	6.8	18.77
23	HPV42	E7	MLLGTLDIV	77	85	9	HLA-A*02:01	0.4	14.38	18.88
24	HPV42	E7	MLLGTLDIV	77	85	9	HLA-A*02:03	0.75	11.6	25.52
25	HPV43	E7	CTSCLCVIR	58	66	9	HLA-A*68:01	0.3	14.01	23.91
26	HPV44	E7	LQLEPPDPV	13	21	9	HLA-A*02:06	0.25	6.29	8.62
27	HPV44	E7	GSLDILCPV	84	92	9	HLA-A*02:06	0.35	4.48	16.16
28	HPV54	E7	NVATIEDIV	4	12	9	HLA-A*68:02	0.4	14.01	22.37
29	HPV54	E7	LLHQDALQIV	78	87	10	HLA-A*02:03	0.5	11.88	22.5
30	HPV54	E7	ETAVTQPDK	36	44	9	HLA-A*68:01	0.6	23.16	32.32
31	HPV61	E7	LLLGDLSIV	82	90	9	HLA-A*02:03	0.35	6.65	12.36
32	HPV61	E7	LLLGDLSIV	82	90	9	HLA-A*02:01	0.5	15.91	21.93
33	HPV61	E7	TIKDIVLEER	7	16	10	HLA-A*68:01	0.5	28.44	29.17
34	HPV61	E7	QVATIKDIV	4	12	9	HLA-A*68:02	0.5	13.7	34.09
35	HPV61	E7	LLLGDLSIV	82	90	9	HLA-A*02:06	0.55	11.13	28.09
36	HPV61	E7	IVLEERPEV	11	19	9	HLA-A*02:06	0.7	18.69	22.68
37	HPV61	E7	LVEQAQQAY	44	52	9	HLA-B*35:01	0.7	14.41	38.42
38	HPV70	E7	LQLFMETLSF	90	99	10	HLA-B*15:01	0.1	3.8	0.22
39	HPV70	E7	METLSFVCPW	94	103	10	HLA-B*44:03	0.15	14.26	23.39
40	HPV70	E7	QLFMETLSFV	91	100	10	HLA-A*02:03	0.15	3.55	4.3
41	HPV70	E7	QLFMETLSFV	91	100	10	HLA-A*02:01	0.2	11.1	8.9
42	HPV70	E7	RPTLQEIVL	5	13	9	HLA-B*07:02	0.3	30.77	38.18
43	HPV70	E7	LFMETLSFV	92	100	9	HLA-A*02:06	0.55	22.75	12.18
44	HPV72	E7	DNLSIVCPR	90	98	9	HLA-A*33:01	0.25	19.06	22.7
45	HPV72	E7	LLLDNLSIV	87	95	9	HLA-A*02:03	0.25	3.5	7.06
46	HPV72	E7	VTTCGRCYR	60	68	9	HLA-A*31:01	0.25	9.8	18.68
47	HPV72	E7	LLLDNLSIV	87	95	9	HLA-A*02:01	0.3	6.75	13.25
48	HPV72	E7	LLLDNLSIV	87	95	9	HLA-A*02:06	0.35	7.31	17.97
49	HPV72	E7	VTTCGRCYR	60	68	9	HLA-A*68:01	0.4	17.62	27.57
50	HPV72	E7	VVTTCGRCYR	59	68	10	HLA-A*31:01	0.4	37.58	34.95
51	HPV72	E7	QVATIKDIV	4	12	9	HLA-A*68:02	0.5	13.7	34.09
52	HPV72	E7	LVEQAQQAY	49	57	9	HLA-B*35:01	0.7	14.41	38.42
53	HPV72	E7	QLLLDNLSIV	86	95	10	HLA-A*02:03	0.75	20.58	32.38
54	HPV81	E7	LLTDTLSIV	85	93	9	HLA-A*02:03	0.25	2.96	7.29
55	HPV81	E7	QLLTDTLSIV	84	93	10	HLA-A*02:03	0.5	15.35	15.01
56	HPV81	E7	TTCGICRCLV	59	68	10	HLA-A*68:02	0.55	26.99	31.21
57	HPV81	E7	LVEQAQQAY	47	55	9	HLA-B*35:01	0.7	14.41	38.42