HPVomics

A therapeutic and epitome resource for Human Papillomaviruses

Efficient putative sgRNAs (CRISPR/Cas9 targets)

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S.No.	HPV type	Target region	sgRNA seuences	PAM	Strand(F/R)	Start	End	GC (%)	Predicted effeciency (%)
1	HPV16	L1	GGAGTACCTACGACATGGGG	AGG	F	1083	1102	60	64.31
2	HPV16	L1	ATAGATGTACAAATATCCAG	TGG	R	836	855	30	63.47
3	HPV16	L1	TTTATAATCCAGATACACAG	CGG	F	269	288	30	63.03
4	HPV16	L1	TCTTCTAGTGTGCCTCCTGG	GGG	R	272	291	55	55.1
5	HPV16	L1	GTAGGTGTTGAGGTAGGTCG	TGG	F	307	326	55	54.11
6	HPV16	L1	CCACCTATAGGGGAACACTG	GGG	F	487	506	55	51.73
7	HPV16	L1	TTTGGTCTACAACCTCCCCC	AGG	F	1210	1229	55	50.94
8	HPV16	L1	GGTCTACAACCTCCCCCAGG	AGG	F	1213	1232	65	47.07
9	HPV16	L1	GGATCTTCTTTAGGTGCTGG	AGG	R	200	219	50	46.11
10	HPV16	L1	TTAAGGAGTACCTACGACAT	GGG	F	1079	1098	40	45.8
11	HPV16	L1	GTAGAGGTAGATGAGGTGGT	GGG	R	32	51	50	45.23
12	HPV16	L1	TATTGGTTACAACGAGCACA	GGG	F	931	950	40	42.05
13	HPV16	L1	TCTAATGGTGGACAATCACC	TGG	R	953	972	45	41.24
14	HPV16	L1	ATATCCAGATTATATTAAAA	TGG	F	690	709	15	40.4
15	HPV16	L1	ATTCCAGTCCTCCAAAATAG	TGG	F	310	329	40	40.06
16	HPV18	L1	GCTGGAGTGGAAATTGGCCG	TGG	F	307	326	60	71.68
17	HPV18	L1	GATGGAGCAGAACGTTTGCG	AGG	R	56	75	55	63.3
18	HPV18	L1	CCAGTGTTCCCCAATAGCAG	GGG	R	1018	1037	55	53.89
19	HPV18	L1	GTGTATTCTCCCTCTCCAAG	TGG	F	868	887	50	50.73
20	HPV18	L1	CTACACAGTCTCCTGTACCT	GGG	F	1040	1059	50	50.41
21	HPV18	L1	ATAGACTGACAAATATCCAA	TGG	R	842	861	30	47.74
22	HPV18	L1	GGCAGGTTTAGAAGACGTAG	TGG	R	31	50	50	46.58
23	HPV18	L1	GTCCTCAGAAACATTAGACG	TGG	R	1099	1118	45	44.18
24	HPV18	L1	GTATCCACCAAACTAGTAGT	TGG	R	272	291	40	43.29
25	HPV18	L1	ATAGCAGTATTTTAGAGGAT	TGG	F	1187	1206	30	42.55
26	HPV18	L1	ACCAAACTAGTAGTTGGCGG	GGG	R	278	297	50	41.72
27	HPV18	L1	ATTGCAAGATACTAAATGTG	AGG	F	636	655	30	40.11
28	HPV26	L1	GGCATCTTCCAAACTAGCAG	TGG	R	259	278	50	60.17
29	HPV26	L1	GGATCTTCCTTTGGCACAGG	AGG	R	191	210	55	58.32
30	HPV26	L1	GGTAGAAGATAAGGGACGTT	TGG	R	43	62	45	56.18
31	HPV26	L1	ACATTTTTATAATAAGGCGG	GGG	F	771	790	30	54.6
32	HPV26	L1	GGTATCTGCCTATCAGTACA	GGG	F	189	208	45	53.37
33	HPV26	L1	GTTGACAACCCGAGACACAG	GGG	R	1444	1463	55	52.41
34	HPV26	L1	GCTGGAAATTAATTCTAAGG	GGG	R	937	956	35	51.39
35	HPV26	L1	ATACCCCAGTGCTCTCCCAA	GGG	R	1004	1023	55	50.07
36	HPV26	L1	ATAAATTGTTTATAATCAGA	TGG	R	419	438	15	48.54
37	HPV26	L1	GTTGGTGTTGAAGTTGGTAG	AGG	F	304	323	45	46.6
38	HPV26	L1	AAAAATACACAGACACAACG	TGG	F	523	542	35	46.41
39	HPV26	L1	AAATACACAGACACAACGTG	GGG	F	525	544	40	46.13
40	HPV26	L1	TCATCCAACTTATTAAACAA	AGG	R	1133	1152	25	46.11
41	HPV26	L1	GATTTGGATCAATTTCCACT	AGG	F	1375	1394	35	45.91
42	HPV26	L1	GAATAAATAGAAGATGTAGG	GGG	R	638	657	30	45.08
43	HPV26	L1	GACATTTTTATAATAAGGCG	GGG	F	770	789	30	41.35
44	HPV26	L1	TGGAAATTAATTCTAAGGGG	GGG	R	939	958	35	41.14
45	HPV26	L1	GTTGGTAGAGGACAGCCATT	AGG	F	316	335	50	40.99
46	HPV26	L1	GCATCTTCCAAACTAGCAGT	GGG	R	260	279	45	40.27
47	HPV26	L1	ATTCCAATCCTCCAATATGG	AGG	R	301	320	40	40.06
48	HPV31	L1	GTTGGTTTAGAGGTAGGTCG	CGG	F	310	329	50	58.77
49	HPV31	L1	GTATCCTCCAAAGAACCTGA	GGG	R	263	282	45	58.5
50	HPV31	L1	ATAGAATTACAAATGTCCAA	AGG	R	830	849	25	54.18
51	HPV31	L1	CTAATGGAGGACAATCACCA	GGG	R	948	967	45	52.49
52	HPV31	L1	GGTATCCTCCAAAGAACCTG	AGG	R	262	281	50	51.1
53	HPV31	L1	CTGTGAGGTGACAAACCTAT	AGG	R	241	260	45	48.24
54	HPV31	L1	GTAGGTCGCGGGCAGCCATT	AGG	F	322	341	65	45.28
55	HPV31	L1	AATAAAAATTTGCGACCCAG	TGG	R	104	123	35	44.9
56	HPV31	L1	TTACCCCAATGCTCTCCAAT	AGG	R	1001	1020	45	43.64
57	HPV31	L1	CCACTAATACCTACACCTAA	TGG	R	1157	1176	40	42.78
58	HPV31	L1	GTAATAGCATTGTTACTACA	AGG	R	971	990	30	41.64
59	HPV31	L1	TCTAATGGAGGACAATCACC	AGG	R	947	966	45	40.83
60	HPV31	L1	GATTTAGATCAGTTTCCACT	GGG	F	1375	1394	35	40.81
61	HPV31	L1	TTGTGCATCTGAAGTAACCA	TGG	R	598	617	40	40.31
62	HPV33	L1	GTAGGCCTTGAAATAGGTAG	AGG	F	310	329	45	57.82
63	HPV33	L1	GGCCTCACTAGGCCGCCACA	CGG	R	1474	1493	70	57.82
64	HPV33	L1	GTATTTATAAGTTCTAAAGG	TGG	R	923	942	25	51.31
65	HPV33	L1	GTACTGCCACAAATATCAAT	AGG	R	818	837	35	49.5
66	HPV33	L1	GTATCCTGTAAACTAGCAGA	TGG	R	254	273	40	46.57
67	HPV33	L1	GGATTTTTAATAGAAAAATA	TGG	R	1337	1356	15	45.14
68	HPV33	L1	GCTTTTTTTCCCACTCCTAG	TGG	F	868	887	45	44.47
69	HPV33	L1	CTAGTTTACAGGATACCTAT	AGG	F	1232	1251	35	44.46
70	HPV33	L1	GGGTCTTCCTTTTCCTTTGG	AGG	R	185	204	50	43.68
71	HPV33	L1	ATAGGTAGAGGGCAGCCATT	AGG	F	322	341	50	42.35
72	HPV33	L1	GCATGTGTAGGCCTTGAAAT	AGG	F	304	323	45	42.33
73	HPV33	L1	TATTGGCTACAACGTGCACA	AGG	F	931	950	45	40.43
74	HPV35	L1	GGCCTCCTATAGGTGAACAT	TGG	F	485	504	50	61.99
75	HPV35	L1	GGCCCAAACCAAACGCTGGG	AGG	R	1207	1226	65	56.93
76	HPV35	L1	CCACTAATACCTACACCCAA	TGG	R	1154	1173	45	55.35
77	HPV35	L1	GTGTCCTCTAAGGTACCAGA	AGG	R	266	285	50	49.53
78	HPV35	L1	ATAGGTTGTAGGCCTCCTAT	AGG	F	475	494	45	48.62
79	HPV35	L1	TCTAAGGTACCAGAAGGCGG	TGG	R	272	291	55	47.18
80	HPV35	L1	CTAAACACTGTACTACAAGA	CGG	F	571	590	35	45.64
81	HPV35	L1	ACAGGAGTTGAAGTAGGTCG	TGG	F	307	326	50	43.67
82	HPV35	L1	ACAACCTTAGACACTGACAC	TGG	R	1445	1464	45	43.51
83	HPV35	L1	GACTTAGATCAATTTCCGTT	GGG	F	1366	1385	35	41.76
84	HPV35	L1	GATTTTTTAGATGTAGATGC	TGG	R	32	51	30	40.1
85	HPV39	L1	GGCAGTATACAGAACTACCG	GGG	R	645	664	50	74.68
86	HPV39	L1	GTATACTGCCCCTCTCCCAG	CGG	F	865	884	60	70.07
87	HPV39	L1	GGAGCACTGGGGTAAGGGAA	AGG	F	495	514	60	67.32
88	HPV39	L1	CCACTAATACCAACACCCAA	TGG	R	1163	1182	45	61.39
89	HPV39	L1	AGCCCAATAATGTATCTACG	GGG	F	524	543	40	55.81
90	HPV39	L1	GGAATATACCAGGCACGTGG	AGG	F	1083	1102	55	53.05
91	HPV39	L1	GGAACTTGATCAATTCCCTT	TGG	F	1371	1390	40	52.86
92	HPV39	L1	GGCTTGTGTAGGGGTGGAGG	TGG	F	300	319	65	49.56
93	HPV39	L1	GTAGGGGTGGAGGTGGGCAG	GGG	F	307	326	70	48.51
94	HPV39	L1	GGGGCAGTATACAGAACTAC	CGG	R	643	662	50	48.39
95	HPV39	L1	TAAGGAATATACCAGGCACG	TGG	F	1080	1099	45	46.8
96	HPV39	L1	GTATGTTCTTCTGTTTACGT	AGG	F	731	750	35	46.14
97	HPV39	L1	ACAACCTTCGCCACAGAAGG	TGG	R	1454	1473	55	45.96
98	HPV39	L1	GGATCTTTCTTTTCAGGTGC	TGG	R	200	219	45	44.75
99	HPV39	L1	GAGGTTACCATGGAACCGCT	GGG	R	617	636	55	42.1
100	HPV39	L1	GGTGTCTGCATATCAATATA	GGG	F	192	211	35	41.1
101	HPV39	L1	GCTTGTGTAGGGGTGGAGGT	GGG	F	301	320	60	41.02
102	HPV39	L1	GGTGGGCAGGGGCCAGCCAT	TGG	F	318	337	75	40.77
103	HPV45	L1	GGGATATTGATCCAAATCGG	AGG	R	142	161	45	67.73
104	HPV45	L1	ATTGCAGGATACAAAGTGCG	AGG	F	639	658	45	54.5
105	HPV45	L1	GTAGGTATGGAAATTGGTCG	TGG	F	310	329	45	53.82
106	HPV45	L1	GGGTCATATGTACTTGGCAC	AGG	R	461	480	50	49.07
107	HPV45	L1	GATTTGGATCAATATCCCCT	TGG	F	1384	1403	40	47.3
108	HPV45	L1	ATAATGTTAAATTAGTACTG	CGG	R	501	520	20	45.78
109	HPV45	L1	ATAGTAGTATATTAGAAAAT	TGG	F	1196	1215	15	43.47
110	HPV45	L1	GAAGTAATAATAGAGCCACT	GGG	R	629	648	35	43.41
111	HPV45	L1	GTGTATTCCCCTTCTCCCAG	TGG	F	877	896	55	43.36
112	HPV45	L1	GGAATACACACAACTGCCAG	GGG	R	658	677	50	43.24
113	HPV45	L1	GGGAATACACACAACTGCCA	GGG	R	657	676	50	43.03
114	HPV45	L1	ACTAAAAACTTTCGACCAAG	GGG	R	122	141	35	42
115	HPV45	L1	GAAGCAGCAGGACGCTTACG	AGG	R	65	84	60	40.66
116	HPV45	L1	GTATCCACCAAACTTGTAGT	AGG	R	281	300	40	40.32
117	HPV45	L1	GCAGTATAGTAGACATGTGG	AGG	F	1095	1114	45	40.04
118	HPV51	L1	CAGAGGATACAAGTTCCAGG	GGG	R	939	958	50	66.46
119	HPV51	L1	ATATACTCTGCTACTCCCAG	TGG	F	868	887	45	62.34
120	HPV51	L1	GGATCTGGCTTAGCCTGTGG	AGG	R	197	216	60	60.49
121	HPV51	L1	GGGTTGTGTGGGCGTTGAGG	TGG	F	297	316	65	56.35
122	HPV51	L1	CAGACTGTGAAATATCCAAA	GGG	R	837	856	35	54.39
123	HPV51	L1	ACAGACTGTGAAATATCCAA	AGG	R	836	855	35	52.15
124	HPV51	L1	AATGGCTTATTTACACACAA	TGG	F	1161	1180	30	48.99
125	HPV51	L1	GGCTGAAGAGGAAGAGGAAG	AGG	R	25	44	55	48.72
126	HPV51	L1	GTATCCTCTGTCATTCAGGA	TGG	F	568	587	45	48.46
127	HPV51	L1	TATATAATCCAGACACAGAT	AGG	F	266	285	30	47.33
128	HPV51	L1	TATTGTGACCCTGCGCACGG	TGG	R	555	574	60	47.02
129	HPV51	L1	GCATCCTCCAAACTAGCAGA	CGG	R	266	285	50	46.18
130	HPV51	L1	GGGCAGTCTCCTGGAGGTAC	AGG	R	962	981	65	45.22
131	HPV51	L1	GGTTGTGTGGGCGTTGAGGT	GGG	F	298	317	60	45.12
132	HPV51	L1	GATGTTATCATAGACCCACT	GGG	R	611	630	40	44.51
133	HPV51	L1	ATCGCCATCCTGAATGACAG	AGG	R	922	941	50	44.34
134	HPV51	L1	GTATTCACAATTCGAGACAC	AGG	R	1445	1464	40	40.74
135	HPV52	L1	GGAATACCTTCGTCATGGCG	AGG	F	1095	1114	55	61.8
136	HPV52	L1	TTTATAACCCAGAAACCCAA	AGG	F	278	297	35	59.14
137	HPV52	L1	GGCCTCACTAGGCCGCCACA	CGG	R	1486	1505	70	57.82
138	HPV52	L1	ACAGGCTTGGAAATTGGTAG	GGG	F	316	335	45	52.2
139	HPV52	L1	TTAGGATGCAAACCTCCTAT	AGG	F	484	503	40	49.12
140	HPV52	L1	CCACTAATACCCACACCTAA	AGG	R	1148	1167	45	48.34
141	HPV52	L1	GGACTATATGTTTTGGGAGG	TGG	F	1338	1357	45	47.17
142	HPV52	L1	AACCTCCTATAGGTGAACAT	TGG	F	494	513	40	45.8
143	HPV52	L1	ACACTGCTACATATATCAAT	GGG	R	821	840	30	44.56
144	HPV52	L1	TTGCCAGTCCTCTAAAATAG	TGG	R	292	311	40	43.46
145	HPV52	L1	GGATCTTCCTTTCCTTTAGG	TGG	R	182	201	45	42.52
146	HPV52	L1	GAGGTTACCATAGAACCACT	AGG	R	593	612	45	42.16
147	HPV52	L1	GCTTTTTTTCCTACTCCTAG	TGG	F	883	902	40	41.88
148	HPV52	L1	ACACTGTTAATGAGCTGTAG	GGG	R	923	942	40	40.72
149	HPV53	L1	GTAGGGCTAGAGATTGGCCG	TGG	F	301	320	60	84.24
150	HPV53	L1	GGGGTAATAAGGATGTCCCA	CGG	R	1348	1367	50	81.15
151	HPV53	L1	CGTTTTTTAGAGGATACAGG	CGG	R	56	75	40	56.89
152	HPV53	L1	GTATTTGTCCTCTAAGCTAG	TGG	R	256	275	40	55.04
153	HPV53	L1	GGGTCCTGCTTTTCAGGAGG	GGG	R	191	210	60	54.25
154	HPV53	L1	GTGAATTGATAAGTTCCAAT	GGG	R	927	946	30	52.55
155	HPV53	L1	TCATCCAACCTATTGAACAG	TGG	R	1124	1143	40	52.42
156	HPV53	L1	GGTGAATTGATAAGTTCCAA	TGG	R	926	945	35	52.32
157	HPV53	L1	AAGCTCTCGCTTGCTTACCG	TGG	F	114	133	55	51.05
158	HPV53	L1	GGATACTGCCCCGGACAGTA	GGG	F	405	424	60	49.73
159	HPV53	L1	TCTAAGCTAGTGGCAACAGG	AGG	R	266	285	50	49.44
160	HPV53	L1	CTATGTGGTTTTATTTACGT	AGG	F	728	747	30	47.72
161	HPV53	L1	ACATATACAGAGCTAGGGGG	CGG	R	632	651	50	45.17
162	HPV53	L1	ACAGTATGTTAGACATGCAG	AGG	F	1074	1093	40	43.63
163	HPV53	L1	GTATATGTTGCTACACCTAG	TGG	F	862	881	40	43.16
164	HPV53	L1	TATTGAGGATGGAGACATGG	TGG	F	576	595	45	41.47
165	HPV53	L1	TAACTGTTGTGGATACCACC	AGG	F	986	1005	45	41.09
166	HPV53	L1	CCACTTACACCAACACCTAA	AGG	R	1151	1170	45	40.8
167	HPV56	L1	GTAGGTTTGGAGGTAGGCCG	CGG	F	304	323	60	69.65
168	HPV56	L1	GCACAGCTATAACATGTCAA	CGG	F	1262	1281	40	57.23
169	HPV56	L1	GGTGTATTAATTAATGCAAG	AGG	R	923	942	30	51.02
170	HPV56	L1	TCATCCAGCCTATTAAACAA	TGG	R	1121	1140	35	49.14
171	HPV56	L1	GCAACATATACAGAACTCGG	AGG	R	626	645	45	48.5
172	HPV56	L1	GGGTCCTGTTTTTCTGTTGG	TGG	R	188	207	50	48.17
173	HPV56	L1	GGACCAGGAACGGTTAGTGT	GGG	F	276	295	55	47.44
174	HPV56	L1	TCAGTACCTTAGACATGTGG	AGG	F	1077	1096	45	46.59
175	HPV56	L1	GCTGGTGTAGAGGTGGAGGT	AGG	R	20	39	60	46.53
176	HPV56	L1	ATAATGTTATAGAAGATAGT	AGG	F	407	426	20	46.45
177	HPV56	L1	CAGCACCTAAAGGCTGTCCG	CGG	R	1158	1177	60	44.45
178	HPV56	L1	ACATATACAGAACTCGGAGG	GGG	R	629	648	45	44.44
179	HPV56	L1	GACCTGGATCAATTTCCACT	GGG	F	1366	1385	45	42.49
180	HPV56	L1	GTATATGTTGCTACGCCTAG	TGG	F	865	884	45	42.35
181	HPV56	L1	GTTGCAGGAATCTAAGGCTG	AGG	F	633	652	50	42.29
182	HPV56	L1	AGAGTAATAGGGATGTCCTA	CGG	R	1348	1367	40	42.07
183	HPV56	L1	GTCCACACAAGTTACCACAG	GGG	F	525	544	50	41.32
184	HPV56	L1	ATTAAAAATTTTCTACCCAG	TGG	R	98	117	25	40.95
185	HPV56	L1	ATATTTATCTTCTAGGCTGG	TGG	R	253	272	35	40.94
186	HPV56	L1	CTCCCGCTATGGGTGAACAT	TGG	F	482	501	55	40.34
187	HPV58	L1	GTACTGTTACAAATATCAAT	AGG	R	815	834	25	58.05
188	HPV58	L1	GTAGGCCTTGAAATAGGTAG	GGG	F	310	329	45	57.82
189	HPV58	L1	GGCCTCACTAGGCCGCCACA	CGG	R	1471	1490	70	57.82
190	HPV58	L1	GGATGGTGCACGGGTAGTAG	GGG	R	28	47	60	56.75
191	HPV58	L1	GGGTTTGGATGCATGGACTT	TGG	F	610	629	50	50.34
192	HPV58	L1	GCATTTTTTCCAACTCCTAG	TGG	F	868	887	40	50.07
193	HPV58	L1	CCACTTACGCCAACACCCAA	TGG	R	1139	1158	55	49.76
194	HPV58	L1	GCTACGAGTGGTATCAACCA	CGG	R	481	500	50	45.66
195	HPV58	L1	GGACTTTTGATGGAAAAATA	TGG	R	1334	1353	30	44.65
196	HPV58	L1	GGATCTTCCTTTTCTTTAGG	GGG	R	182	201	40	44.32
197	HPV58	L1	TTACCCCAATGCTCACCAGT	GGG	R	983	1002	50	44.09
198	HPV58	L1	ATAGAATTAAAAAGTTCCAA	TGG	R	917	936	20	43.18
199	HPV58	L1	TATGGATTCCAATATTTTGG	AGG	F	1176	1195	30	43.17
200	HPV58	L1	ACAACCTTAGACACAGGCAC	AGG	R	1433	1452	50	42.99
201	HPV58	L1	GCATGTGTAGGCCTTGAAAT	AGG	F	304	323	45	42.33
202	HPV59	L1	GTAGGTGTTGAAATCGGTCG	GGG	F	307	326	50	52.31
203	HPV59	L1	GGTGTATCTACCTCCACCTT	CGG	F	30	49	50	49.39
204	HPV59	L1	ATAGACTGACAAATATCCAA	TGG	R	845	864	30	47.74
205	HPV59	L1	TTATATTCCCCTTCCCCAAG	TGG	F	868	887	45	45.24
206	HPV59	L1	GCATATTCTTTAAAACTGGT	AGG	R	434	453	30	43.99
207	HPV59	L1	GCAGGCGCTGCACGTTTGCG	TGG	R	59	78	70	43.49
208	HPV59	L1	TGAGTCCTACCCCTAAAGGT	TGG	R	1176	1195	50	41.6
209	HPV59	L1	GGGGAATATAAATAACTGCC	TGG	R	650	669	40	40.76
210	HPV66	L1	GGAACATTGGACTAAGGGCG	CGG	F	495	514	55	82.31
211	HPV66	L1	GTAGGTTTGGAGGTAGGCCG	AGG	F	304	323	60	69.65
212	HPV66	L1	GGTGAAGAAGAGGAAGAGGT	AGG	R	23	42	50	60.15
213	HPV66	L1	GTAGTTCATATTCCTCCACA	TGG	R	402	421	40	58.92
214	HPV66	L1	GCACAGCTATTACATGTCAG	AGG	F	1262	1281	45	57.29
215	HPV66	L1	GGGATCCTGCTTTTCTGCAG	GGG	R	199	218	55	53.99
216	HPV66	L1	GGGGTATTAACTAATGCAAG	AGG	R	935	954	40	50.29
217	HPV66	L1	GTCTACACCAGGTAATACAG	GGG	F	525	544	45	50.18
218	HPV66	L1	GCAACATATACAGAACTGGG	AGG	R	638	657	45	50.03
219	HPV66	L1	GGATCCTGCTTTTCTGCAGG	GGG	R	200	219	55	49.59
220	HPV66	L1	GGGATGTGCACCAGCATTAG	GGG	F	474	493	55	47.56
221	HPV66	L1	ACATATACAGAACTGGGAGG	AGG	R	641	660	45	45.16
222	HPV66	L1	GTATATGTTGCTACTCCTAG	TGG	F	865	884	40	45.13
223	HPV66	L1	TCTAAGCTAGTTGCAACTGG	TGG	R	275	294	45	44.93
224	HPV66	L1	ATAATGTTATAGAAGATAGC	CGG	F	407	426	25	41.46
225	HPV66	L1	GGGGATCCTGCTTTTCTGCA	GGG	R	198	217	55	41.41
226	HPV66	L1	GTAGATTGTACAATGTCCAA	TGG	R	833	852	35	41.11
227	HPV66	L1	TGGTCAGGATTATAGAAAGA	TGG	R	1232	1251	35	40.97
228	HPV66	L1	ACACTAGCCTTGGGTCTAGG	GGG	R	71	90	55	40.37
229	HPV68	L1	GTATCTACAAGACTAGCAGA	TGG	R	266	285	40	57.64
230	HPV68	L1	GAGTATTTACCAATTCCAAT	GGG	R	939	958	30	56.63
231	HPV68	L1	GTTGGTGTTGAAATAGGTAG	GGG	F	307	326	40	53.03
232	HPV68	L1	GGTAGATGTGGTAGCTGCAG	TGG	R	34	53	55	52.16
233	HPV68	L1	GGAGTATTTACCAATTCCAA	TGG	R	938	957	35	52.09
234	HPV68	L1	ATTACAAGAAACGAAAAGCG	AGG	F	636	655	35	50.1
235	HPV68	L1	GGACTGTCCCCCATTGGAAT	TGG	F	549	568	55	47.69
236	HPV68	L1	GCAGTGGCAGTGCGTTTACG	AGG	R	50	69	60	47.68
237	HPV68	L1	GGAATATGTTAGGCATGTTG	AGG	F	1086	1105	40	47.33
238	HPV68	L1	GTATGATTCTAATAAATTTA	AGG	F	1065	1084	15	46.87
239	HPV68	L1	GTATTTGCCTCCCCCCTCAG	TGG	F	33	52	60	46.39
240	HPV68	L1	ATAAAAATCCTAAAGACAGT	AGG	F	410	429	25	45.18
241	HPV68	L1	GGAATAGGGGAGGCATGGTA	GGG	F	782	801	55	44.6
242	HPV68	L1	GGATTTTTATTAGAGGAAAA	CGG	R	1100	1119	25	43.87
243	HPV68	L1	GGATATGGTGCTATGGACTT	TGG	F	610	629	45	43.53
244	HPV68	L1	ACTGCGCGTTGTATCCACAA	CGG	R	502	521	50	42.68
245	HPV68	L1	GTGTATGCCCCCTCGCCTAG	CGG	F	868	887	65	42.56
246	HPV68	L1	TCATCCAGCCTATTATATAG	TGG	R	1136	1155	35	42.49
247	HPV68	L1	GCATCCACTATATAATAGGC	TGG	F	357	376	40	42.39
248	HPV68	L1	ACAAGGGGACTGTCCCCCAT	TGG	F	543	562	60	41.82
249	HPV68	L1	CCATAGACCCGCTAGGCGAG	GGG	R	621	640	65	40.78
250	HPV68	L1	ACAAGACTAGCAGATGGTGG	AGG	R	272	291	50	40.32
251	HPV68	L1	GGGGCATACACATAACTACT	AGG	R	641	660	45	40.08
252	HPV73	L1	GGGTGTTCTTTAATTCCAGT	GGG	R	939	958	40	74.63
253	HPV73	L1	GTAGTGTTAGAAATATCAAT	AGG	R	836	855	25	66.08
254	HPV73	L1	GGGGTGTTCTTTAATTCCAG	TGG	R	938	957	45	62.46
255	HPV73	L1	TCAACCTCCTAAAGAAACAG	AGG	F	1293	1312	40	58.79
256	HPV73	L1	CCTACGAAGATAAAACCACA	TGG	R	763	782	40	51.7
257	HPV73	L1	GGATAAAAAACACAACTGGA	TGG	R	641	660	35	51.28
258	HPV73	L1	GTTGGACGTGGACAACCCTT	AGG	F	313	332	55	50.12
259	HPV73	L1	TCTGGTGTGGAGGTTGGACG	TGG	F	301	320	60	50.04
260	HPV73	L1	GGTCTTACCCCACCACCGTC	AGG	F	1213	1232	65	50.01
261	HPV73	L1	GGCCTCCCTTAGGGGAACAT	TGG	F	479	498	60	49.78
262	HPV73	L1	GGGTCCTCTGTTTCTTTAGG	AGG	R	194	213	50	49.16
263	HPV73	L1	ACAACCTTAGACACAGACAC	AGG	R	1454	1473	45	47.92
264	HPV73	L1	GGTGTTCTTTAATTCCAGTG	GGG	R	940	959	40	47.07
265	HPV73	L1	CCACTAGTACCTATACCTAA	GGG	R	1163	1182	40	46.3
266	HPV73	L1	ATTGCTGGACAAAATACAGA	TGG	F	400	419	35	45.73
267	HPV73	L1	CTGTGCATCTGAAGAAACCA	TGG	R	604	623	45	42.43
268	HPV73	L1	TGGTAGAGAATGTATGTCAG	TGG	F	420	439	40	41.41
269	HPV73	L1	CTTAAGATCTACATCCCAAA	AGG	R	157	176	35	41.03
270	HPV73	L1	GGCATGGCTGCTGATCCCTA	TGG	F	700	719	60	40.32
271	HPV73	L1	ATCCCTATGGTGATTCCATG	TGG	F	713	732	45	40.27
272	HPV73	L1	TTAGGTTGTAGGCCTCCCTT	AGG	F	469	488	50	40.23
273	HPV82	L1	GGCATCCTCCAAACTAGCGG	AGG	R	259	278	60	62.18
274	HPV82	L1	GGGTCTTCTTTAGCCTGTGG	AGG	R	191	210	55	57.59
275	HPV82	L1	GGATTTGGATCAGTTTGCAT	TGG	F	1374	1393	40	57.29
276	HPV82	L1	ATAGGCATCCTCCAAACTAG	CGG	R	256	275	45	54.76
277	HPV82	L1	GGATGTGTTGGTGTTGAAGT	AGG	F	298	317	45	51.66
278	HPV82	L1	GTTGGTGTTGAAGTAGGTAG	GGG	F	304	323	45	50.9
279	HPV82	L1	GCATCCTCCAAACTAGCGGA	GGG	R	260	279	55	48.19
280	HPV82	L1	TATGGCTTACCTGCACACCA	TGG	F	1164	1183	50	47.2
281	HPV82	L1	GTAGACACAAGTTCCAAAGG	TGG	R	938	957	45	46.94
282	HPV82	L1	TGTTGTCCCTAACATCCTGT	TGG	R	1077	1096	45	46.13
283	HPV82	L1	GAGGTTATCATAGAACCACT	GGG	R	608	627	40	46.07
284	HPV82	L1	GGGGCAGGCCTTTTAAGGCC	TGG	R	50	69	65	44.34
285	HPV82	L1	GGCCTGGTCTGGGTTTGCGT	TGG	R	66	85	65	43.29
286	HPV82	L1	GGCAGACGAGGAAGCGGAAG	AGG	R	25	44	65	41.71
287	HPV82	L1	GCCCCCCTCCGCTAGTTTGG	AGG	F	1227	1246	70	41.21
288	HPV82	L1	ACAGACTGAGCAATATCCAA	TGG	R	833	852	40	40.47