HPVomics

A therapeutic and epitome resource for Human Papillomaviruses

Efficient putative sgRNAs (CRISPR/Cas9 targets)

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S.No.	HPV type	Target region	sgRNA seuences	PAM	Strand(F/R)	Start	End	GC (%)	Predicted effeciency (%)
1	HPV6	L2	GGAACTGTGGTGTTACCCCA	CGG	R	215	234	55	70.87
2	HPV6	L2	GGGTCTATGCACACTCGCAG	CGG	F	907	926	60	59.42
3	HPV6	L2	GGTACAGTCGCATTGGACAA	CGG	F	884	903	50	58.89
4	HPV6	L2	GGACTAAAGGGTGTTCCCAT	AGG	R	131	150	50	57.71
5	HPV6	L2	GGTTTTGCAGAAGTTTGTAA	GGG	R	1142	1161	35	57.42
6	HPV6	L2	GGTTGGGGTTGTGTTACAGA	AGG	R	872	891	50	56.5
7	HPV6	L2	ACACAATAGATGGATCCGAA	GGG	R	1065	1084	40	53.45
8	HPV6	L2	CTAATACAGTTACACAACCG	TGG	F	1127	1146	40	53.2
9	HPV6	L2	GCCACATCTGAAAAAAATAA	GGG	R	8	27	30	49.42
10	HPV6	L2	GGCACGGGTTCCGGCACTGG	GGG	F	178	197	75	49.38
11	HPV6	L2	TATAGGCCCACACGAGGCCG	AGG	R	707	726	65	49.38
12	HPV6	L2	GGGGTGTTTTTTGGAGGGTT	GGG	F	151	170	50	49.36
13	HPV6	L2	TGATACATCCAATATTGCAG	GGG	R	946	965	35	48.76
14	HPV6	L2	AATACAGTTACACAACCGTG	GGG	F	1129	1148	40	48.7
15	HPV6	L2	GGTGGAGCCTGTGGCCCCTT	CGG	F	279	298	70	48.15
16	HPV6	L2	GGCTCGTCCTCCTGTGGTGG	TGG	F	261	280	70	47.96
17	HPV6	L2	AACACAACCCCAACCACCCG	TGG	F	495	514	60	47.54
18	HPV6	L2	ATTGTGCCCCCTGCACACGG	TGG	F	361	380	65	46.74
19	HPV6	L2	GGAGGGTTGGGTATAGGCAC	GGG	F	163	182	60	45.38
20	HPV6	L2	ATAGGGTGTGACGTTACAGT	GGG	R	812	831	45	45.38
21	HPV6	L2	AGGTGCAGTACCAGGAACAG	GGG	R	727	746	55	44.47
22	HPV6	L2	TACAGTCGCATTGGACAACG	GGG	F	886	905	50	44.19
23	HPV6	L2	GCAAAACCTTCTATTACTAG	TGG	F	232	251	35	43.67
24	HPV6	L2	TATAGGGTGTGACGTTACAG	TGG	R	811	830	45	43.49
25	HPV6	L2	AGGTCATTAGGAAGTGACAA	TGG	R	194	213	40	43.28
26	HPV6	L2	ACAGTCGCATTGGACAACGG	GGG	F	887	906	55	42.76
27	HPV6	L2	ACAGGCTCCACCACCACAGG	AGG	R	1091	1110	65	42.2
28	HPV6	L2	TGTCCATTAGCCTCCACGGG	TGG	R	851	870	60	41.16
29	HPV6	L2	GGTGCAATGCACGACTATAT	AGG	R	690	709	45	40.89
30	HPV6	L2	GGTGTTCCCATAGGTGCAGT	AGG	R	140	159	55	40.05
31	HPV11	L2	GGCTTGGGAGAGCTTCCCAA	GGG	R	1133	1152	60	73.14
32	HPV11	L2	GGGTCCATGTACACACGCAG	TGG	F	904	923	60	71.37
33	HPV11	L2	GACCAGCTATAACGTCCAGA	CGG	F	848	867	50	59.71
34	HPV11	L2	CTGTGGCGTGGACAAAAACG	CGG	R	640	659	55	57.57
35	HPV11	L2	ACAGACGGTTCTGTAAACAG	GGG	R	878	897	45	55.99
36	HPV11	L2	CGAGGCCGAGGAAAAGCACG	AGG	R	710	729	65	52.79
37	HPV11	L2	GGTTGGGGCTGTATTACAGA	CGG	R	863	882	50	50.26
38	HPV11	L2	GGAAGAGGAGTACTGGATGT	AGG	R	731	750	50	49.91
39	HPV11	L2	GGGATTTTGAAACACACTAG	TGG	R	898	917	40	49.8
40	HPV11	L2	GGGTCAGGGATAGGGTCAAA	TGG	R	296	315	55	48.89
41	HPV11	L2	GTGGCGTGGACAAAAACGCG	GGG	R	642	661	60	46.35
42	HPV11	L2	GCTTTTCCTCGGCCTCGGGT	GGG	F	643	662	65	44.24
43	HPV11	L2	CCAGCTATAACGTCCAGACG	GGG	F	850	869	55	44.23
44	HPV11	L2	GGTGTTCCCATAGATGCAGT	AGG	R	140	159	50	43.68
45	HPV11	L2	CAGTCACTAGGGATTGACAA	TGG	R	194	213	45	42.19
46	HPV11	L2	GGGGTTTTTTTTGGTGGGTT	AGG	F	148	167	45	41.43
47	HPV11	L2	GATACAACAAAAGTGTCTAG	TGG	R	770	789	35	41.04
48	HPV11	L2	CCAAGCCTGCTATTACTGGG	GGG	F	230	249	55	40.79
49	HPV11	L2	GGTACAGGGGCTGGTAGTGG	CGG	F	175	194	65	40.78
50	HPV11	L2	TTTAGTCGCATTGGGCAACG	GGG	F	883	902	50	40.32
51	HPV11	L2	GCCACATCTGTAAAAAATAA	GGG	R	8	27	30	40.32
52	HPV11	L2	GCAACAGGCTCCACAAGCAC	TGG	R	1079	1098	60	40.31
53	HPV11	L2	TACAAACCCACCCGAGGCCG	AGG	R	698	717	65	40.3
54	HPV40	L2	GGAACGGGTGTACTGGACAA	TGG	R	755	774	55	61.13
55	HPV40	L2	CCTGCATTAACGTCTCGGCG	GGG	F	862	881	60	59.5
56	HPV40	L2	GGCACCATGTACACACGGCG	AGG	F	916	935	65	58.81
57	HPV40	L2	GGGATGGGCTGCACAACCGA	GGG	R	878	897	65	54.44
58	HPV40	L2	ATATCAAACATGCAAGGCGG	CGG	F	51	70	45	54.21
59	HPV40	L2	GGTTCCGGCTCTGGCACAGG	GGG	F	178	197	70	54.03
60	HPV40	L2	GGCCTGCATTAACGTCTCGG	CGG	F	860	879	60	53.36
61	HPV40	L2	GGTGGCCTAGCAACAACGTC	AGG	R	1121	1140	60	51.78
62	HPV40	L2	TAATAATGTGTCAGAAACCG	TGG	R	181	200	35	51.13
63	HPV40	L2	GCAGGTATAGAAGGTGACAC	AGG	R	104	123	50	49.39
64	HPV40	L2	GGCCTCGGCACCACATACAC	TGG	F	1023	1042	65	49.23
65	HPV40	L2	GGGTGTCATACGCTTTAGCA	GGG	F	882	901	50	48.04
66	HPV40	L2	ATATGTAATTAAACGCTGAG	GGG	R	649	668	30	47.44
67	HPV40	L2	GTAATGATGTCCATAAACGC	AGG	R	554	573	40	45.58
68	HPV40	L2	TTACTATTCCAACAGAGGGT	GGG	F	374	393	40	45.41
69	HPV40	L2	TAATGATGTCCATAAACGCA	GGG	R	555	574	35	45.27
70	HPV40	L2	TCATATGTAATTAAACGCTG	AGG	R	647	666	30	45.2
71	HPV40	L2	GCAACAGTATCCACAACCAC	AGG	R	1100	1119	50	45.19
72	HPV40	L2	ATATCATCAGCTGCACCAAT	AGG	R	401	420	40	44.66
73	HPV40	L2	GTTATATCAAACATGCAAGG	CGG	F	48	67	35	43.64
74	HPV40	L2	TGGGATGGGCTGCACAACCG	AGG	R	877	896	65	42.29
75	HPV40	L2	TCAGGTACCAAAGATTTAGG	AGG	R	1139	1158	40	41.84
76	HPV40	L2	TCTGTTGGAATAGTAAGGGA	CGG	R	1016	1035	40	41.21
77	HPV40	L2	GGCAGGCACATCTGTACCGG	AGG	R	973	992	65	41
78	HPV40	L2	ACAGTATCCACAACCACAGG	TGG	R	1103	1122	50	40.17
79	HPV42	L2	GGCACTGGTGCAGGTACGGG	TGG	F	178	197	70	62.88
80	HPV42	L2	AGATGTAGTGGACAAACGGG	GGG	R	256	275	50	58.38
81	HPV42	L2	ACAGGAGGCCTTGTTCCCAG	AGG	R	1196	1215	60	56.36
82	HPV42	L2	GGGGTAGCAAAACCATGCAT	AGG	R	275	294	50	51.9
83	HPV42	L2	ATATTACTACATCTACTGGT	GGG	F	389	408	30	50.41
84	HPV42	L2	GGTATTTCTTCATATGAGTG	GGG	R	836	855	35	49.97
85	HPV42	L2	GTGTTAGTAGAATTGGACAA	AGG	F	905	924	35	48.06
86	HPV42	L2	ACACGTATAGTATTAGTGGG	AGG	R	968	987	40	45.29
87	HPV42	L2	GGGGAGATATCTAATATAGC	AGG	R	989	1008	40	45.29
88	HPV42	L2	TGGCAGATAAAATTTTACAA	TGG	F	119	138	25	45.01
89	HPV42	L2	AGAAGGATCAGATGGCCCCA	CGG	R	1126	1145	55	44.52
90	HPV42	L2	TTTTTTTGCAGATGTCCGTG	TGG	F	1404	1423	40	43.93
91	HPV42	L2	GGGGGGTTGGGAATTGGCAC	TGG	F	163	182	65	43.74
92	HPV42	L2	GAAACAATAGAAGGATCAGA	TGG	R	1118	1137	35	43.26
93	HPV42	L2	AAAGATGTAGTGGACAAACG	GGG	R	254	273	40	42.49
94	HPV42	L2	AGCCTATGAAGGACTTACGG	AGG	F	774	793	50	42.22
95	HPV42	L2	GGAAAGATGTAGTGGACAAA	CGG	R	252	271	40	41.77
96	HPV42	L2	GGGCCCTGATTTATCTGTTG	TGG	F	1257	1276	50	40.99
97	HPV42	L2	GTAAAAGGATCAATATATAA	AGG	R	923	942	20	40.36
98	HPV43	L2	GGAACAGGCTCAGGAACTGG	AGG	F	178	197	60	61.17
99	HPV43	L2	GGGAGTGTATTTTGGAGGGT	TGG	F	150	169	50	56.97
100	HPV43	L2	GGGGAAATAGATGGGGACAC	AGG	R	116	135	55	56.38
101	HPV43	L2	GGAATAGGTGTGCTAGTGGT	AGG	R	740	759	50	56.05
102	HPV43	L2	GGTACTATGTATACTCGCAG	TGG	F	919	938	45	52.95
103	HPV43	L2	GGAGTGTATTTTGGAGGGTT	GGG	F	151	170	45	50.94
104	HPV43	L2	CCTGCATTAACATCCCGACG	AGG	F	865	884	55	50.48
105	HPV43	L2	TCACTAGTATCAGAAACAGT	AGG	R	329	348	35	49.56
106	HPV43	L2	GGAATGTGAATAGGAATAGT	AGG	R	146	165	35	46.71
107	HPV43	L2	TATTAGTTCCATACCCACAG	AGG	F	978	997	40	45.09
108	HPV43	L2	GGAGGACGTGACACTACTCC	AGG	R	1106	1125	60	44.84
109	HPV43	L2	GGGGTTGGCTGTACAATAGT	AGG	R	863	882	50	44.63
110	HPV43	L2	TTACTGTACAGGCCCAAACG	AGG	R	701	720	50	44.37
111	HPV43	L2	ATATCAGGTACAGTTGCAAG	TGG	R	200	219	40	44.12
112	HPV43	L2	GGTAACCTCCTCTGGATCAG	AGG	F	405	424	55	43.7
113	HPV43	L2	GACACAATAGAAGGATCAGT	TGG	R	1061	1080	40	42.59
114	HPV43	L2	TTTTACAGATAACTATGTGG	CGG	F	1365	1384	30	42.56
115	HPV43	L2	GGAATATATGGAATGTGAAT	AGG	R	137	156	30	41.36
116	HPV44	L2	GGGACAGTAGTATTGCCCCA	TGG	R	215	234	55	72.82
117	HPV44	L2	GGGAATGTCAGGACGCGGGG	TGG	R	1135	1154	70	72.61
118	HPV44	L2	GGAAGGAGGGACCAATTCCG	GGG	R	1009	1028	60	70.15
119	HPV44	L2	GGAGTTGTAGTGGATGCAGT	AGG	R	140	159	50	64.28
120	HPV44	L2	GGGTCTATGTACACACGTAG	TGG	F	910	929	50	62.37
121	HPV44	L2	GGTACAGGCTCTGGCACAGG	CGG	F	178	197	65	60.22
122	HPV44	L2	GCTGCGACTGTACAACAGAT	GGG	R	873	892	50	58.18
123	HPV44	L2	TTACTGTATAGGCCAATACG	CGG	R	701	720	40	51.15
124	HPV44	L2	TTCCCTCTGTACCTACCGCA	AGG	F	245	264	55	49.77
125	HPV44	L2	ACAGAGGGAATGTCAGGACG	CGG	R	1130	1149	55	49.73
126	HPV44	L2	GGGTTTTTTTTGGGGGACTG	GGG	F	152	171	50	48.41
127	HPV44	L2	AATCTGCTATTATAAATTCG	GGG	F	329	348	25	48.25
128	HPV44	L2	AGAGGGAATGTCAGGACGCG	GGG	R	1132	1151	60	47.5
129	HPV44	L2	TTTAGTAGAATTGGACAACG	AGG	F	889	908	35	47.15
130	HPV44	L2	GCAACAGTATCAACAAGTAT	AGG	R	1091	1110	35	45.95
131	HPV44	L2	GGAATGGGAGTGCTAGATGC	AGG	R	740	759	55	45.35
132	HPV44	L2	CTTCTGTGTCAGCCACCCCA	TGG	F	1130	1149	60	45.29
133	HPV44	L2	GGGGGACTGGGGATTGGTAC	AGG	F	163	182	65	44.31
134	HPV44	L2	GGACGCGGGGTGGATTGTAA	AGG	R	1145	1164	60	42.74
135	HPV44	L2	CCAAAGGTATTTCTTCTACA	GGG	R	795	814	35	41.61
136	HPV44	L2	AGACCGCTGAAAGGGTGTGG	AGG	R	253	272	60	40.34
137	HPV44	L2	TTGCAGATCAGATATTAAAG	TGG	F	119	138	30	40.14
138	HPV54	L2	GGTGACATCTAATATAGCAG	GGG	R	982	1001	40	77.39
139	HPV54	L2	GGTACTGGTAGTGGCACAGG	GGG	F	178	197	60	61.01
140	HPV54	L2	GGTTGTACGTTATAGTAGGG	TGG	F	885	904	45	60.75
141	HPV54	L2	GGGAATATAAACCTAAGCGT	GGG	R	729	748	40	55.88
142	HPV54	L2	GGTCCTCCTGTACGTCCCGC	AGG	F	250	269	70	54.22
143	HPV54	L2	GGGGGCTTGGGAATAGGTAC	TGG	F	163	182	60	51.07
144	HPV54	L2	AGTGGACGATTGCAAAGTAG	AGG	R	841	860	45	49.64
145	HPV54	L2	GCCACATTACACACACGTAG	TGG	F	916	935	50	49.12
146	HPV54	L2	ATAATTATAAAAGTGTCCAT	AGG	R	806	825	20	46.25
147	HPV54	L2	TCTTGCAGATGGCTATGTGG	CGG	F	1386	1405	50	46.21
148	HPV54	L2	GGGGGGTTGTACGTTATAGT	AGG	F	881	900	50	43.78
149	HPV54	L2	GGCCTAAAGGATGTGGGTAT	AGG	R	164	183	50	42.85
150	HPV54	L2	GTAGTAGAGGGTCGTCCAAG	TGG	R	1175	1194	55	42.83
151	HPV54	L2	GGTGTAATTCTATTTCCTCA	GGG	R	396	415	35	42.46
152	HPV54	L2	GCAGATGCACGTTTCCGGCG	TGG	R	1373	1392	65	42.16
153	HPV54	L2	GGGGGTTGTACGTTATAGTA	GGG	F	882	901	45	41.9
154	HPV54	L2	TAGCAGATCAAATCCTACGA	TGG	F	119	138	40	41.26
155	HPV54	L2	TATGGCGATGAGGCAGTTAG	GGG	R	191	210	50	41.24
156	HPV54	L2	AGGCACTTGCTGTAACGCAC	GGG	R	709	728	55	40.15
157	HPV54	L2	ATAGTTGTACCCTCTACCTT	AGG	R	1295	1314	40	40.13
158	HPV61	L2	GGGCCAATATCCACTACAGT	AGG	R	1133	1152	50	61.9
159	HPV61	L2	AGTAATGTCCAACACAGCCG	GGG	R	955	974	50	57.08
160	HPV61	L2	TTTCCAGTACCCCTACCGCT	GGG	F	536	555	55	51.26
161	HPV61	L2	GGCGGGGCCGTGCAAGGCGA	CGG	R	720	739	80	50.6
162	HPV61	L2	ACTGGATCAATAACTACAGG	GGG	R	1100	1119	40	50.1
163	HPV61	L2	GGGGACGAGGACGGCACCAA	AGG	R	362	381	70	49.42
164	HPV61	L2	GCTGGATCAGACATAAATGT	AGG	R	653	672	40	49.31
165	HPV61	L2	GGAGTAATGTCCAACACAGC	CGG	R	953	972	50	49.25
166	HPV61	L2	GGGCCCTGTACTGTAAGTGT	GGG	R	275	294	55	48.93
167	HPV61	L2	GGCACCGGCTCTGGTACTGG	GGG	F	169	188	70	48.04
168	HPV61	L2	AGGACCCTCAGAGGTAGCAA	AGG	R	769	788	55	46.5
169	HPV61	L2	GTAGGAGGCCGGGTGCCAAT	AGG	R	1151	1170	65	45.24
170	HPV61	L2	ACCTGCACAGACCCACCCGA	TGG	R	932	951	65	44.97
171	HPV61	L2	TCACTGTTCCACTGGCCACA	GGG	F	1148	1167	55	44.79
172	HPV61	L2	CTTACTGTATAAATTCAGGC	GGG	R	703	722	35	44.67
173	HPV61	L2	TATTGAACCTCCTCAGGCAG	GGG	F	495	514	50	44.49
174	HPV61	L2	GGGGGATTGGGTATAGGCAC	CGG	F	154	173	60	44.24
175	HPV61	L2	ATTGTCATATGTAATTAAGG	AGG	R	631	650	25	43.98
176	HPV61	L2	TTACTGTATAAATTCAGGCG	GGG	R	704	723	35	43.78
177	HPV61	L2	CCACTGGATCAATAACTACA	GGG	R	1098	1117	40	43.38
178	HPV61	L2	CTCAAAACTGTGGGACCCAG	CGG	R	808	827	55	42.69
179	HPV61	L2	ATAGAAGGCTCAGTGAATAA	AGG	R	887	906	35	42.08
180	HPV61	L2	GGTACAGCTGGTACAGGCGC	AGG	R	140	159	65	41.81
181	HPV61	L2	GGATGGGTGGCAGGTACATA	TGG	R	119	138	55	40.92
182	HPV61	L2	ACCTTTGGAACAACATCAGG	GGG	R	1286	1305	45	40.52
183	HPV61	L2	GGTACTGGAAATGACATGGC	CGG	R	835	854	50	40.5
184	HPV61	L2	TATATCATATGTTATACTAG	GGG	R	343	362	20	40.47
185	HPV61	L2	GTATCAAGCCCTGTGGCCAG	TGG	R	203	222	60	40.12
186	HPV70	L2	CCTGCTTTAACCTCACGACG	CGG	F	853	872	55	55.27
187	HPV70	L2	GTATAGAAGGAAATGAAAGA	TGG	R	261	280	30	54.54
188	HPV70	L2	GTAGATTCAGAGGTAAGTAA	AGG	R	374	393	35	53.12
189	HPV70	L2	GGGTGGTTTGGGAATCGGTA	CGG	F	162	181	55	52.8
190	HPV70	L2	GTACTAGGCCTACCCCCCAA	AGG	R	1163	1182	60	52.28
191	HPV70	L2	TAGGCCCTACTATATAAACG	TGG	R	710	729	40	52.21
192	HPV70	L2	GGGGTAATATCTAATACAGC	AGG	R	968	987	40	52
193	HPV70	L2	TGATGTTGTTAATAAGGTGG	AGG	F	87	106	35	51.41
194	HPV70	L2	GGTACGGGTACTGGTACTGG	GGG	F	178	197	60	51.35
195	HPV70	L2	ATAGATGTAGGAGGGACAAA	GGG	R	125	144	40	50.7
196	HPV70	L2	GGAACAGGAGTACTACTAAT	AGG	R	755	774	40	50.3
197	HPV70	L2	TGGTATCTATAGATGTAGGA	GGG	R	117	136	35	47.89
198	HPV70	L2	ACCTTATTAACAACATCAGG	CGG	R	1298	1317	35	45.08
199	HPV70	L2	GCCTGATGTTGTTAATAAGG	TGG	F	84	103	40	44.73
200	HPV70	L2	GGCCACAATGTTTACCCGGC	GGG	F	906	925	60	43.97
201	HPV70	L2	GGAGGGACAAAGGGCAAATT	GGG	R	134	153	50	43.77
202	HPV70	L2	GGATCAGGAGCTGTGTCAGC	AGG	R	581	600	60	43.77
203	HPV70	L2	CTTACCTCTGAATCTACAGA	TGG	F	1012	1031	40	41.93
204	HPV70	L2	TGTGGAACCTCAATTAACGA	TGG	R	887	906	40	41.76
205	HPV70	L2	GGTGGTTTGGGAATCGGTAC	GGG	F	163	182	55	41.16
206	HPV70	L2	ACAGGTTCTATAACCACAGG	AGG	R	1115	1134	45	40.58
207	HPV70	L2	AGGCCACAATGTTTACCCGG	CGG	F	905	924	55	40.51
208	HPV72	L2	GGATGCGTAGAGGGTACAAG	AGG	R	119	138	55	71.05
209	HPV72	L2	GGGCCTATATCCACAACAGT	GGG	R	1148	1167	50	65.94
210	HPV72	L2	GGAAGGGTCTGCGGCCCCCA	CGG	R	1096	1115	75	65.39
211	HPV72	L2	GTAGAAGACACAGAAGCACG	CGG	R	293	312	50	60.02
212	HPV72	L2	ACTTGGACAGACGCTCCAGA	GGG	R	947	966	55	59.12
213	HPV72	L2	GTATCGCACATGCAAACAGG	CGG	F	48	67	50	57.02
214	HPV72	L2	GGGGTCGAGACAAAAAGGCA	GGG	R	657	676	55	56.71
215	HPV72	L2	TATTGAACCTCCACAGGCCG	GGG	F	501	520	55	56.62
216	HPV72	L2	GGCACGGGTTCAGGCACCGG	TGG	F	175	194	75	56.11
217	HPV72	L2	GGGGTGTTCTTTGGTGGGTT	AGG	F	148	167	55	53.38
218	HPV72	L2	CCTTTGGTATAACATCAGGA	GGG	R	1302	1321	40	51.2
219	HPV72	L2	AGACACAGAAGCACGCGGCG	GGG	R	298	317	65	49.26
220	HPV72	L2	GAAGACACAGAAGCACGCGG	CGG	R	296	315	60	48.48
221	HPV72	L2	GGTGGGTTAGGCATAGGCAC	GGG	F	160	179	60	48.42
222	HPV72	L2	GGCTGACCCGTACTGTACCC	TGG	R	498	517	65	48.42
223	HPV72	L2	ACTTCAGGAACCTATCAGCA	AGG	R	1266	1285	45	48.13
224	HPV72	L2	TGACCCGTACTGTACCCTGG	CGG	R	501	520	60	44.93
225	HPV72	L2	GGTGACTATGGAAGGGTCTG	CGG	R	1087	1106	55	44.71
226	HPV72	L2	GCACGGGTTCAGGCACCGGT	GGG	F	176	195	70	44.05
227	HPV72	L2	GGCATTGTAGGTACAGGGGC	AGG	R	140	159	60	43.85
228	HPV72	L2	TGTAATGTCTAAAACAGCAG	GGG	R	970	989	35	43.79
229	HPV72	L2	GGTGTAATGTCTAAAACAGC	AGG	R	968	987	40	42.55
230	HPV72	L2	GTGTAATGTCTAAAACAGCA	GGG	R	969	988	35	41.98
231	HPV72	L2	GCTACCTTGCGTACACGTAG	TGG	F	919	938	55	41.7
232	HPV72	L2	GTTTCCTCTGGATCATACAC	AGG	R	611	630	45	41.41
233	HPV72	L2	CTGTTGTTATTGAGCCCGTG	GGG	F	269	288	50	40.9
234	HPV72	L2	CCAAAAAGTCAGGATCAGGA	GGG	R	558	577	45	40.56
235	HPV72	L2	ACGGGCTCAATAACAACAGG	CGG	R	1115	1134	50	40.44
236	HPV72	L2	AATAGAATGTGGATGCGTAG	AGG	R	109	128	40	40
237	HPV81	L2	GGGTAGTTGCAGGAAACGAA	GGG	R	120	139	50	72.32
238	HPV81	L2	GGCATCTGCAGAAGACACAG	AGG	R	364	383	55	66.02
239	HPV81	L2	GGGTTAGTCGTATTGGTCAG	CGG	F	896	915	50	63.27
240	HPV81	L2	GGGACTATAGAAGGGGCTAA	AGG	R	140	159	50	60.43
241	HPV81	L2	GGTCACGTACAGGAACCTGT	TGG	R	696	715	55	59.07
242	HPV81	L2	GGGGTAGTTGCAGGAAACGA	AGG	R	119	138	55	54.76
243	HPV81	L2	GGACCTATATCAACTACAGA	AGG	R	1166	1185	40	54.19
244	HPV81	L2	GGTACGGCCTCTGGCTCCGG	TGG	F	175	194	75	49.89
245	HPV81	L2	GGAGTAATATCTAGGACAGC	AGG	R	986	1005	45	48.73
246	HPV81	L2	GGCATAGGTGTACTACTTAT	GGG	R	770	789	40	46.56
247	HPV81	L2	AGAGGACCTGGAAGACAAAG	AGG	R	286	305	50	44.57
248	HPV81	L2	TGCTGGGTCCCATAGTTACG	AGG	F	558	577	55	41.63
249	HPV81	L2	TTTTACAGATGGCTATGTGG	CGG	F	1389	1408	40	41.57
250	HPV81	L2	GTTTCCTCTGGATCATACAC	AGG	R	629	648	45	41.41
251	HPV81	L2	GCCTCCTTACGTACCCGCAG	TGG	F	919	938	65	40.48