HPVomics

A therapeutic and epitome resource for Human Papillomaviruses

Efficient putative sgRNAs (CRISPR/Cas9 targets)

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S.No.	HPV type	Target region	sgRNA seuences	PAM	Strand(F/R)	Start	End	GC (%)	Predicted effeciency (%)
1	HPV16	L2	GGAACAGGGTCGGGTACAGG	CGG	F	181	200	65	50.17
2	HPV16	L2	CTAAATCCTGATACATCTGG	GGG	R	1022	1041	40	48.91
3	HPV16	L2	ATAACCTGATAAAGATGTAG	AGG	R	244	263	30	48.46
4	HPV16	L2	CTAACAATAAATGTATCCAT	AGG	R	812	831	25	44.03
5	HPV16	L2	GGAACTATAGGAATTAATGA	AGG	R	128	147	30	43.01
6	HPV16	L2	GAAACTATAGAAGGATCAGA	AGG	R	1103	1122	35	42.69
7	HPV16	L2	CTAGTAGCACACCCATACCA	GGG	F	632	651	50	42.21
8	HPV16	L2	ATAATCCTAGGCGTGCCACT	GGG	R	741	760	50	42.1
9	HPV16	L2	AATCCATTATTAATAGAAGT	AGG	R	329	348	20	41.57
10	HPV16	L2	AGAGGGTACAGATGGTACCG	GGG	R	262	281	55	41.24
11	HPV16	L2	CCTTTAACAGTAGATCCTGT	GGG	F	274	293	40	40.84
12	HPV16	L2	ATATTGTATGCACCACCAAA	AGG	R	200	219	35	40.7
13	HPV16	L2	GGTGTATTTTTTGGTGGGTT	AGG	F	154	173	40	40.59
14	HPV16	L2	GCAAATACAACAATTCCTTT	TGG	F	1186	1205	30	40.5
15	HPV18	L2	GGGTGGGCGTTCCAATACAG	TGG	F	222	241	60	63
16	HPV18	L2	GGTACTGGCAGTGGTACAGG	GGG	F	178	197	60	62.29
17	HPV18	L2	GGTTGTGGAAATAGACACAG	AGG	R	925	944	45	61.06
18	HPV18	L2	ATAGACACAGAGGTAGACGA	AGG	R	935	954	45	58.16
19	HPV18	L2	GAATCAGGAACATCACTACG	AGG	R	569	588	45	55.22
20	HPV18	L2	GTTTGCGTCGTGCGGCACGG	TGG	R	1359	1378	70	55.17
21	HPV18	L2	GGAAGAGGCAGAAGATATAG	TGG	R	241	260	45	54.08
22	HPV18	L2	GGCCATACAGAGGTAGTAGA	TGG	R	146	165	50	53.02
23	HPV18	L2	TAGGCCCTACTGTAAAGGCG	GGG	R	698	717	55	52.39
24	HPV18	L2	GTATTGGAACGCCCACCCAA	TGG	R	1151	1170	55	51.48
25	HPV18	L2	GGTGTGATATCCAAAACCGC	AGG	R	956	975	50	49.86
26	HPV18	L2	TGATGTTGTTCCTAAGGTGG	AGG	F	87	106	45	48.38
27	HPV18	L2	CCACAGGTTCAATAACCACT	GGG	R	1101	1120	45	48.3
28	HPV18	L2	GGGGCCGTGGGTGATACAAT	GGG	R	125	144	60	48.11
29	HPV18	L2	GCTTTAGTAGATTAGGTCAA	CGG	F	884	903	35	47.29
30	HPV18	L2	CTATTAATGTAACAATAGAT	GGG	R	1068	1087	20	46.95
31	HPV18	L2	GGTAGGCCCTACTGTAAAGG	CGG	R	696	715	55	46.21
32	HPV18	L2	TGGGCGTTCCAATACAGTGG	TGG	F	225	244	55	46.15
33	HPV18	L2	GTTGTCATATGTAATTAAAG	AGG	R	631	650	25	45.56
34	HPV18	L2	TGGATATTATCCGTCTACAT	AGG	F	830	849	35	45.32
35	HPV18	L2	TTAGGAATAAAATAATATAA	TGG	R	53	72	10	44.59
36	HPV18	L2	GGCCTACCAACAAGTGTCAG	TGG	F	687	706	55	44.52
37	HPV18	L2	GTCCACCCAAAAATATACCA	AGG	R	1221	1240	40	44.5
38	HPV18	L2	CCTGCTTTAACATCCAGGCG	TGG	F	853	872	55	44.1
39	HPV18	L2	TGATACAATGGGCCATACAG	AGG	R	136	155	45	43.9
40	HPV18	L2	GTAACAATAGATGGGTCTGT	GGG	R	1076	1095	40	43.7
41	HPV18	L2	GGTGGACTTGGCATAGGTAC	TGG	F	163	182	55	42.6
42	HPV18	L2	GTATACAGGCACATCCCAAG	AGG	R	190	209	50	42.29
43	HPV18	L2	ACCTTAGGAACAACATCAGG	TGG	R	1286	1305	45	41.81
44	HPV18	L2	TATTGAAGTTCCACAAACTG	GGG	F	501	520	35	41.03
45	HPV18	L2	GCGATGGTACAGGCACTGCA	GGG	R	300	319	60	40.51
46	HPV18	L2	GTACCCCATTGCCTACTGTG	CGG	F	635	654	55	40.36
47	HPV18	L2	CCAGACGTGCCAGTAAACGT	AGG	R	1010	1029	55	40.17
48	HPV18	L2	TAGCAGATAAAATATTGCAA	TGG	F	119	138	25	40.14
49	HPV18	L2	ACAGGTTCAATAACCACTGG	GGG	R	1103	1122	45	40.11
50	HPV26	L2	GGGCCGATATCCACAACAGA	GGG	R	1160	1179	55	65.76
51	HPV26	L2	GGTAAGTTAGTGGTGGGTGG	GGG	R	113	132	55	61.9
52	HPV26	L2	GGTTTGGGAATATTTTTAGG	TGG	F	145	164	35	56.88
53	HPV26	L2	GGATACATTCCCCTAGGAGG	GGG	F	208	227	55	55.09
54	HPV26	L2	TTGCTGATAAGATATTACAA	TGG	F	119	138	25	54.8
55	HPV26	L2	GGGCAATGATGGCCATGTCG	GGG	R	136	155	60	54.18
56	HPV26	L2	GGTAGTGGAAGTATTAATAG	AGG	R	235	254	35	53.23
57	HPV26	L2	GGTCTACCACCCCCTCCTAG	GGG	R	1181	1200	65	52.18
58	HPV26	L2	GGTACAGGAACTGGGTCTGG	TGG	F	178	197	60	50.03
59	HPV26	L2	TAGGCCTTACTATACAAACG	AGG	R	725	744	40	48.86
60	HPV26	L2	TATAGATATACCACAGGCCG	GGG	F	501	520	45	48.64
61	HPV26	L2	GGGGTGATGTCCAACACAGC	AGG	R	983	1002	60	47.78
62	HPV26	L2	GATAAGATATTACAATGGAG	TGG	F	124	143	30	47.1
63	HPV26	L2	GCTGATGCTCGTTTGCGTCG	AGG	R	1379	1398	60	46.87
64	HPV26	L2	GGGGGCAATGATGGCCATGT	CGG	R	134	153	60	46.71
65	HPV26	L2	GTAGGGGAATATGACATGCG	CGG	R	296	315	50	46.37
66	HPV26	L2	GGAATAGGTGTACTACTAAT	AGG	R	770	789	35	45.93
67	HPV26	L2	GGCCATGTCGGGGAAGATGT	GGG	R	146	165	60	45.37
68	HPV26	L2	TCTGCATATATATCAAACAA	AGG	R	347	366	25	44.79
69	HPV26	L2	ATTTTAGGAATAACATCAGG	AGG	R	1316	1335	30	44.58
70	HPV26	L2	GGGGCAATGATGGCCATGTC	GGG	R	135	154	60	44.42
71	HPV26	L2	ATTAATAGAGGAAAACACAT	TGG	R	247	266	25	44.04
72	HPV26	L2	GTAACTATAGAAGGTTCTGT	AGG	R	1103	1122	35	43.82
73	HPV26	L2	ATTGTAATATCTTATCAGCA	AGG	R	1281	1300	25	43.04
74	HPV26	L2	ACAGGTTCAATAATAATGGG	CGG	R	1130	1149	35	42.72
75	HPV26	L2	ATAGGGGGTTCAATATATAA	TGG	R	917	936	30	42.69
76	HPV26	L2	GCCACTATGAAAACACGTAG	TGG	F	913	932	45	42.41
77	HPV26	L2	GGAGGGATTACCAATAAAAT	TGG	R	679	698	35	42.13
78	HPV26	L2	TTACCTGCAATAGTTGTGCA	TGG	F	1303	1322	40	42.02
79	HPV26	L2	CGTACTGGATACATTCCCCT	AGG	F	202	221	50	41.38
80	HPV26	L2	GAATGGGTAGATGTATGTAA	AGG	F	377	396	35	41.38
81	HPV26	L2	TCAAAGGTAACAAATGTGGA	GGG	F	662	681	35	40.83
82	HPV31	L2	GGGTCCGGCTCTGGTACTGG	GGG	F	181	200	70	55.41
83	HPV31	L2	GTAGTTGCAGACGCCCCTAA	AGG	R	371	390	55	49.77
84	HPV31	L2	GTAGGAGGCTGCAATACAGA	TGG	R	899	918	50	47.89
85	HPV31	L2	TAGATATTATAGCATTACAT	AGG	F	830	849	20	45.5
86	HPV31	L2	CTTACTATAGAGGGGTCCAA	GGG	R	1082	1101	45	45.43
87	HPV31	L2	GGCCTGCCCTTACCTCACGT	AGG	F	851	870	65	45.27
88	HPV31	L2	ATAACCCTAAACGTGCAGGA	CGG	R	735	754	45	42.66
89	HPV31	L2	ACAGATGGATCAGTAAAAGT	AGG	R	914	933	35	42.64
90	HPV31	L2	TGGACTGTACAGCAGTAGAA	GGG	R	264	283	45	42.35
91	HPV31	L2	ACAGGGTCAATGCTAACTGG	TGG	R	1109	1128	50	41.49
92	HPV33	L2	GGAGGACGTATAGGCTGCAA	GGG	R	1133	1152	55	58.62
93	HPV33	L2	GGCACAGGCTCTGGTTCAGG	TGG	F	178	197	65	58.02
94	HPV33	L2	GTAGTAACATCAAAACCTGA	TGG	R	1007	1026	35	57.59
95	HPV33	L2	GGGCTAGATGTGGGAAATAA	AGG	R	146	165	45	54.64
96	HPV33	L2	ACTTTAGGAATAACATCGGG	TGG	R	1301	1320	40	48.74
97	HPV33	L2	GTAGGTGGGTCAGTACCAAT	AGG	R	1166	1185	50	48.58
98	HPV33	L2	GCTAGATGTGGGAAATAAAG	GGG	R	148	167	40	48.49
99	HPV33	L2	GCCACACTTAAAACTCGCAG	TGG	F	922	941	50	47.31
100	HPV33	L2	ACTGTCTGTGGAAACAACAA	AGG	R	784	803	40	45.41
101	HPV33	L2	TAGATATTATTGCATTACAT	AGG	F	845	864	20	45.3
102	HPV33	L2	ATATAGTCGCAATACCCAAC	AGG	F	681	700	40	45.06
103	HPV33	L2	GGAACAAATGGGCTAGATGT	GGG	R	137	156	45	44.59
104	HPV33	L2	ACAGTGTCTACAGTAACCGG	AGG	R	1115	1134	50	44.59
105	HPV33	L2	TATTGCGACTATATAAACCA	AGG	R	711	730	30	43.08
106	HPV33	L2	TCTTAAATATGGCAGTTTAG	GGG	F	132	151	30	41.6
107	HPV33	L2	GGTGTAGGAATAGATGGGGC	TGG	R	1028	1047	55	41.23
108	HPV33	L2	GGTGGTTTAGGTATTGGCAC	AGG	F	163	182	50	40.92
109	HPV35	L2	GGACCCTTGGTGTAACAACA	GGG	R	1020	1039	50	56.28
110	HPV35	L2	GGTTCTGGATCTGGCACAGG	TGG	F	181	200	60	53.23
111	HPV35	L2	TGGACATTATAGCTTTACAT	AGG	F	842	861	30	50.18
112	HPV35	L2	ATGATATTCCTATAACAGCA	GGG	F	1208	1227	30	49.54
113	HPV35	L2	GTTGGAGGTGTTGTACCCAG	TGG	R	1169	1188	55	49.38
114	HPV35	L2	ACTGTACTACCGGTACCCAC	AGG	F	1267	1286	55	48.48
115	HPV35	L2	GGGACCCTTGGTGTAACAAC	AGG	R	1019	1038	55	48.29
116	HPV35	L2	ACTACTATACCATTAAGTAG	TGG	F	1183	1202	30	47.89
117	HPV35	L2	GTGCCCCTGTTGTTACACCA	AGG	F	365	384	55	46.54
118	HPV35	L2	GGAATGTTTGTGGCAGCCGT	TGG	R	1151	1170	55	46.22
119	HPV35	L2	GACACTATAGAAGAATCTAA	AGG	R	1079	1098	30	45.05
120	HPV35	L2	ATACTTTCCACAGTTACAGG	GGG	R	1121	1140	40	43.89
121	HPV35	L2	TATACTTTCCACAGTTACAG	GGG	R	1120	1139	35	43.39
122	HPV35	L2	ATATAGTAAAGGTACCCAGC	AGG	F	678	697	40	42.98
123	HPV35	L2	ATAATCCTAGGCGTGTCGTA	GGG	R	732	751	45	42.71
124	HPV35	L2	TCTGCAATAATAGAATATAT	AGG	R	98	117	20	42.38
125	HPV35	L2	AGATCTGGATATGTTCCACT	GGG	F	205	224	40	42.21
126	HPV35	L2	ATATCATAGCCACTACTTAA	TGG	R	197	216	30	40.9
127	HPV35	L2	GGGTCGTATAGGAATGTTTG	TGG	R	1141	1160	45	40.69
128	HPV35	L2	CTAATAGCACGCCTATTCCA	GGG	F	629	648	45	40.41
129	HPV39	L2	TGTGCTCTACTATATAAACG	TGG	R	722	741	35	60.86
130	HPV39	L2	GGTTATTTGTACAGACCCAG	AGG	R	955	974	45	58.25
131	HPV39	L2	GCTTACGCCTGGCAGCACGG	TGG	R	1383	1402	70	57.46
132	HPV39	L2	CCTTACTGTTCCTTTACGCG	AGG	R	529	548	50	56.43
133	HPV39	L2	GTATTAGGCCTACCCCCCAG	GGG	R	1175	1194	60	56.15
134	HPV39	L2	GGTGTAGGTGTGCTGCTAAT	AGG	R	767	786	50	50.65
135	HPV39	L2	GGTGTAATATCCAATACCGC	AGG	R	980	999	45	49.57
136	HPV39	L2	GGTGGGTTAGGCATAGGCAC	AGG	F	163	182	60	48.42
137	HPV39	L2	ACTGACAAATATATTACCCG	AGG	R	865	884	35	48.32
138	HPV39	L2	ATATTCCATGAGGTACTAAA	AGG	R	200	219	30	48.22
139	HPV39	L2	ATAGCCATCTGAAAAAAAAT	AGG	R	13	32	25	48.19
140	HPV39	L2	GGCACAGGTACTGGTACTGG	GGG	F	178	197	60	48
141	HPV39	L2	ACAGGTTCAATAACTACAGG	TGG	R	1127	1146	40	47.82
142	HPV39	L2	ATACTGCATTTAATAATACA	AGG	F	1088	1107	20	45.91
143	HPV39	L2	TTGCTGACAAAATTTTACAG	TGG	F	119	138	30	43.32
144	HPV39	L2	ATATAGAACCTGTAAACAAT	CGG	F	51	70	25	42.76
145	HPV39	L2	GCTACCATGGTTACCCGGCG	TGG	F	907	926	65	42.23
146	HPV39	L2	GATGGCTCAGAAGGACCAAC	AGG	R	1109	1128	55	41.64
147	HPV39	L2	AATGCATCTGAAGCATCAGA	GGG	R	368	387	40	41.44
148	HPV39	L2	ATTGGTCCAGAAGGCACCAA	TGG	R	125	144	50	41.39
149	HPV39	L2	GTTGTGTCTATTGGTCCAGA	AGG	R	116	135	45	40.95
150	HPV39	L2	GCACAGGATATATACCCCTG	GGG	F	203	222	50	40.45
151	HPV45	L2	GGGATGTGTTAAAAACTGTG	AGG	R	658	677	40	70.83
152	HPV45	L2	GGAGATGTACTAGGCCACAT	AGG	R	134	153	50	64.27
153	HPV45	L2	TTAGCCCTACTATACAGGCG	GGG	R	701	720	50	63.45
154	HPV45	L2	GGGCAGGTCTAATACTGTTG	TGG	F	225	244	50	61.41
155	HPV45	L2	GGTGTAGTGGACGCAGGAGG	TGG	R	311	330	65	61.27
156	HPV45	L2	GCTTGCGACGTGCTGCACGG	TGG	R	1362	1381	70	61.15
157	HPV45	L2	GGTAGGCTCAAAGGATAGTG	TGG	R	589	608	50	59.23
158	HPV45	L2	GGCATGGTCAAGGAATACTT	TGG	R	260	279	45	55.36
159	HPV45	L2	TTAGGAAAATAATAATACCA	TGG	R	53	72	20	55.29
160	HPV45	L2	GTTGGACATCACACCTACCG	TGG	F	420	439	55	54.09
161	HPV45	L2	CCAGCATTATCCTCTAGACG	TGG	F	853	872	50	53.42
162	HPV45	L2	TAGCTGATAAAATTTTACAG	TGG	F	119	138	25	52.74
163	HPV45	L2	ACTTTGTTAATAACATCAGG	GGG	R	1289	1308	30	51.23
164	HPV45	L2	GTAACAATAGATGGATCAGT	AGG	R	1079	1098	35	51
165	HPV45	L2	GGCCACCCAAAAATATCCCA	AGG	R	1224	1243	50	50.29
166	HPV45	L2	ATAGAAACAGAGTCCACGGT	AGG	R	938	957	45	50.05
167	HPV45	L2	GGCCACATAGGAGTATGGGA	TGG	R	146	165	55	49.33
168	HPV45	L2	CTAGGTGTAGTGGACGCAGG	AGG	R	308	327	60	48.8
169	HPV45	L2	GGTACCGGCAGTGGTTCTGG	AGG	F	178	197	65	48.05
170	HPV45	L2	TATTGAGGTGCCCCAAACAG	GGG	F	501	520	50	46.86
171	HPV45	L2	ACAGGTTCAATAACCACAGG	TGG	R	1106	1125	45	44.92
172	HPV45	L2	GATTAGCCCTACTATACAGG	CGG	R	699	718	45	44.29
173	HPV45	L2	GGATGCAGCAGTAGAAGGCA	TGG	R	244	263	55	43.91
174	HPV45	L2	AGACGTAATTTCAAACCCAG	AGG	R	997	1016	40	43.63
175	HPV45	L2	GTACCCCCCTCCCTACTGTG	CGG	F	635	654	65	43.56
176	HPV45	L2	GGTGTGATGTCCAACACAGC	TGG	R	959	978	55	43.47
177	HPV45	L2	ATAGGTGGTGGTGGAAGCAT	TGG	R	109	128	50	42.08
178	HPV45	L2	GGGTCCCCGCCTGTATAGTA	GGG	F	666	685	60	41.67
179	HPV45	L2	GCAACCATGTTTACACGTAG	TGG	F	907	926	45	41.44
180	HPV45	L2	CGTAGTGGTAAACAAATAGG	GGG	F	922	941	40	40.35
181	HPV51	L2	GGGTGATGTCCAACACAGCA	GGG	R	972	991	55	66.47
182	HPV51	L2	GGTGATGTCCAACACAGCAG	GGG	R	973	992	55	62.69
183	HPV51	L2	GGGTTGGGTATATTTTTGGG	TGG	F	145	164	45	61.17
184	HPV51	L2	GGAGCAATATCCACCACGCC	TGG	R	1148	1167	60	58.53
185	HPV51	L2	TGGCCGATAAAATATTACAG	TGG	F	119	138	35	58.38
186	HPV51	L2	GTACTGGGTCTGGATCTGGG	GGG	F	179	198	60	58.04
187	HPV51	L2	GGATATATCCCTTTAGGTGG	TGG	F	208	227	45	56.17
188	HPV51	L2	GGAGTAGGTGTGCTGCTAAT	AGG	R	758	777	50	51.11
189	HPV51	L2	GGGCAACTGCCTAGACAAAG	AGG	R	268	287	55	49.84
190	HPV51	L2	GGGCGACCCCCACCACCTAA	AGG	R	1169	1188	70	49.28
191	HPV51	L2	TAGGACTTACTATACAAGCG	GGG	R	713	732	40	49.09
192	HPV51	L2	TTAAATGTAACAAATGTGGA	TGG	R	650	669	25	48.52
193	HPV51	L2	GGGGTGATGTCCAACACAGC	AGG	R	971	990	60	47.78
194	HPV51	L2	GTACCAGTAAAGGTAGGTAT	AGG	R	1031	1050	40	45.64
195	HPV51	L2	TTAGCAGCACACCTACTCCA	GGG	F	632	651	50	45.4
196	HPV51	L2	CCATCGGTACCAGTAAAGGT	AGG	R	1025	1044	50	44.41
197	HPV51	L2	GGCCATACTGTAGGAGATGT	GGG	R	146	165	50	44.34
198	HPV51	L2	ACCTTATTCACAACATCAGG	AGG	R	1304	1323	40	42.03
199	HPV51	L2	GCCACCATGCGCACTCGTAG	TGG	F	913	932	65	41.7
200	HPV51	L2	TGTAGGACTTACTATACAAG	CGG	R	711	730	35	41.37
201	HPV51	L2	TCATAACTATAATTATTAGA	AGG	R	362	381	15	41.18
202	HPV51	L2	GATAAAATATTACAGTGGAG	TGG	F	124	143	30	40.83
203	HPV51	L2	GGTACTGGGTCTGGATCTGG	GGG	F	178	197	60	40.64
204	HPV52	L2	GGAGTATGTGTGGGTAACGA	AGG	R	146	165	50	63.98
205	HPV52	L2	CCTGTAACTGTAGAACCCAT	TGG	F	271	290	45	53.47
206	HPV52	L2	TTATGGGTAGAAAGTGTGGA	AGG	R	257	276	40	52.71
207	HPV52	L2	AATGGGTTCTACAGTTACAG	GGG	R	1111	1130	40	51.96
208	HPV52	L2	TTTAAAATATGGCAGCCTAG	GGG	F	132	151	35	49.3
209	HPV52	L2	ACTTTAGGAATAACATCGGG	GGG	R	1298	1317	40	48.74
210	HPV52	L2	AGATGCTTCTGCAGGTGCCG	GGG	R	868	887	60	48.12
211	HPV52	L2	TGTGGAAGGTAAGTGAAACG	TGG	R	271	290	45	48.04
212	HPV52	L2	GGTACAGGTGCAGGCTCTGG	TGG	F	178	197	65	47.31
213	HPV52	L2	GGAGGTTTGGGTATAGGTAC	AGG	F	163	182	50	45.87
214	HPV52	L2	TCTATCATAGAAACTATAGA	TGG	R	1076	1095	25	45.05
215	HPV52	L2	GCCACCCTACGTACACGTAG	TGG	F	922	941	60	45.02
216	HPV52	L2	CCTGCATTAACCTCTCGAAG	AGG	F	868	887	50	44.85
217	HPV52	L2	GTGGTAATACTACTAGTGGG	AGG	R	1148	1167	45	44.62
218	HPV52	L2	AGATGGTTCTAAGGGACCAA	TGG	R	1093	1112	45	44.17
219	HPV52	L2	ACTACTAGTGGGAGGACGAG	TGG	R	1156	1175	55	43.81
220	HPV52	L2	GGAACAAAAGGAGTATGTGT	GGG	R	137	156	40	43.31
221	HPV52	L2	TGGCACGGCTATATAAACCA	AGG	R	708	727	45	41.98
222	HPV52	L2	GTAGGGGCTATAGGAACAAA	AGG	R	125	144	45	41.94
223	HPV52	L2	GGGGTGTTTTTTGGAGGTTT	GGG	F	151	170	45	41.1
224	HPV52	L2	ATAGATGGTTCAGTGAATGT	AGG	R	899	918	35	40.81
225	HPV53	L2	GGGGGACCTCAATAACAGGA	GGG	R	879	898	55	67.59
226	HPV53	L2	GGGCTGATAAAATATTGCAA	TGG	F	119	138	35	66.38
227	HPV53	L2	GCTTACGTCTGCGTGCCCGG	TGG	R	1362	1381	70	61.9
228	HPV53	L2	GGAATAGGAGTACTACTGAT	AGG	R	746	765	40	59.78
229	HPV53	L2	GGATCAGGTGCCACACCTGA	TGG	R	572	591	60	56.55
230	HPV53	L2	GTACTACCACTAAAAGACAA	AGG	R	239	258	35	55.97
231	HPV53	L2	GGCACTGGCTCTGGCACTGG	GGG	F	178	197	70	55.32
232	HPV53	L2	ACATCCCAAGATGTACCAAA	GGG	R	200	219	40	51.28
233	HPV53	L2	AGTAGAACTAACATGTACAG	AGG	R	928	947	35	49.77
234	HPV53	L2	GGCTTTTTTATATAAACGTG	GGG	R	703	722	30	49.16
235	HPV53	L2	AGGTGCATAAGGCCATGTAG	GGG	R	136	155	50	47.07
236	HPV53	L2	ACATGTACAGAGGTAGAGGT	GGG	R	938	957	45	46.47
237	HPV53	L2	GCACTGGCTCTGGCACTGGG	GGG	F	179	198	70	45.64
238	HPV53	L2	GGCCATGTAGGGGGTCCTGT	GGG	R	146	165	65	44.72
239	HPV53	L2	GTGGAAGGCCTAGTACCCAA	AGG	R	1154	1173	55	42.65
240	HPV53	L2	GGTGCATAAGGCCATGTAGG	GGG	R	137	156	55	42.55
241	HPV53	L2	GTAACAATTGAAGGGTCAGT	GGG	R	1079	1098	40	41.16
242	HPV53	L2	GGTGTGCGTTTTAGTAGGCT	TGG	F	877	896	50	40.6
243	HPV53	L2	TGGGGGACCTCAATAACAGG	AGG	R	878	897	55	40.54
244	HPV53	L2	GTATTATCTGTAGACAATAA	TGG	R	365	384	25	40.4
245	HPV56	L2	GGGTCAGGAGCCACACCCGA	CGG	R	575	594	70	69.73
246	HPV56	L2	GGGCTGATAAAATATTGCAA	TGG	F	119	138	35	66.38
247	HPV56	L2	GCTACTATACAAACACGTAG	AGG	F	907	926	40	58.85
248	HPV56	L2	GGTGTAATATCCAACACGGC	AGG	R	962	981	50	58.35
249	HPV56	L2	GGGATCAATAAATAACGGAT	TGG	R	901	920	35	56.34
250	HPV56	L2	CTATTGTTGTGGAATCCGTA	GGG	F	269	288	40	53.59
251	HPV56	L2	GGCCTGCATTTACTACACGT	AGG	F	851	870	50	53.56
252	HPV56	L2	GGTACAGGAACTGGGTCTGG	GGG	F	178	197	60	50.03
253	HPV56	L2	GGAATAGGAGTACTACTAAT	AGG	R	749	768	35	49.78
254	HPV56	L2	GGAAGGGTCTGTAGGCCCTA	CGG	R	1090	1109	60	48.82
255	HPV56	L2	CTACGTCTAAAAAAATACAC	AGG	R	53	72	30	48.09
256	HPV56	L2	TGTGGGGCCTCAATAACAGG	GGG	R	881	900	55	47.67
257	HPV56	L2	ATAAGGAGACTGAGGAACAA	AGG	R	124	143	40	46.48
258	HPV56	L2	GTTTGCGTCGTGTGGCACGG	TGG	R	1365	1384	65	46.15
259	HPV56	L2	GGGGTGGTGTACGTTTTAGT	AGG	F	872	891	50	45.86
260	HPV56	L2	GGTTGGTGTAATATCCAACA	CGG	R	958	977	40	44.37
261	HPV56	L2	GTGTCAGTACCTTCAAAAAG	TGG	R	614	633	40	42.45
262	HPV56	L2	GCTGCAATACGCCTAAAGCC	TGG	R	728	747	55	42.14
263	HPV56	L2	ATCATAATAATAATGCACAC	GGG	R	430	449	25	41.06
264	HPV56	L2	GGCCACGTACTGGGGCCTGT	AGG	R	146	165	70	40.89
265	HPV56	L2	TTTTGCAGATGGCGACGTGG	CGG	F	1368	1387	55	40.77
266	HPV56	L2	GGAGGCCTTGGCATTGGTAC	AGG	F	163	182	60	40.71
267	HPV56	L2	GTAACATCATAAGGAGACTG	AGG	R	116	135	40	40.6
268	HPV56	L2	CTAGCAAAAGACAATGTGGA	AGG	R	245	264	40	40.54
269	HPV58	L2	GATACAATAGAAGAATCCAA	AGG	R	1103	1122	30	63.15
270	HPV58	L2	CCTGCATTAACCTCTCGCAG	GGG	F	868	887	55	58.85
271	HPV58	L2	GTGGTAATATCAAAACCAGA	TGG	R	1022	1041	35	55.56
272	HPV58	L2	GGAGGTTTAGGCATTGGTAC	AGG	F	163	182	50	55.22
273	HPV58	L2	GGAAAATATTAAATGTCCAG	AGG	R	868	887	30	54.58
274	HPV58	L2	GGGGGACGTATGGGCTGTAA	AGG	R	1148	1167	60	52.19
275	HPV58	L2	ACTGTCAGTAGAAATAACAA	AGG	R	799	818	30	51.93
276	HPV58	L2	CTTTGGGTATAACATCAGGT	GGG	R	1317	1336	40	51.76
277	HPV58	L2	GGTACAGGGTCGGGTACAGG	TGG	F	178	197	65	49.24
278	HPV58	L2	GCTACACTTCGTACTCGCAG	TGG	F	922	941	55	48.62
279	HPV58	L2	GGACACATTACTGGTACGTG	TGG	R	235	254	50	47.97
280	HPV58	L2	GGGTACTGTACGTTATAGTA	GGG	F	888	907	40	46.84
281	HPV58	L2	GGAGTGGGAATTGATGGGGC	TGG	R	1043	1062	60	46.22
282	HPV58	L2	GGGGTACTGTACGTTATAGT	AGG	F	887	906	45	44.88
283	HPV58	L2	TTTTTTTGCAGATGTCCGTG	TGG	F	1389	1408	40	43.93
284	HPV58	L2	GGTAGCTTAGGGGTGTTTTT	TGG	F	142	161	45	42.24
285	HPV58	L2	GGGGTGTTTTTTGGAGGTTT	AGG	F	151	170	45	41.1
286	HPV58	L2	ACTTTGGGTATAACATCAGG	TGG	R	1316	1335	40	40.69
287	HPV58	L2	AAAGGTATAGCCTCAGACGG	TGG	R	1166	1185	50	40.15
288	HPV59	L2	GGAACACGTTTACGTTTACG	AGG	R	35	54	45	60.03
289	HPV59	L2	GGTTTAGTAGGCTAGGACAA	CGG	F	881	900	45	59.31
290	HPV59	L2	GGTACTGGATCTGGTACCGG	TGG	F	178	197	60	59.07
291	HPV59	L2	GTTTACGACGAGCAGCACGA	TGG	R	1365	1384	55	58.45
292	HPV59	L2	GGGGTTATATCCAAAACAGC	TGG	R	962	981	45	58.42
293	HPV59	L2	GGGTCTGGAACCTCTGATGA	GGG	R	578	597	55	51.4
294	HPV59	L2	GGGGAACCTCAATGACAGAA	GGG	R	885	904	50	51.32
295	HPV59	L2	GGTCTGGAACCTCTGATGAG	GGG	R	579	598	55	51.19
296	HPV59	L2	GCAGCCTGGGAAGAAACAAG	AGG	R	371	390	55	49.55
297	HPV59	L2	TAGCTGATAAAATATTGCAG	TGG	F	119	138	30	49
298	HPV59	L2	GGTGGACTAGGTATTGGTAC	TGG	F	163	182	50	43.47
299	HPV59	L2	ACTTTATTAATAACATCAGA	AGG	R	1292	1311	20	43.32
300	HPV59	L2	TCATATGTAACAAATGTGGA	TGG	R	644	663	30	42.84
301	HPV59	L2	ACAGGTTCAATAACTACTGG	TGG	R	1109	1128	40	42.53
302	HPV59	L2	GTAACTATAGATGGATCTGT	AGG	R	1082	1101	35	40.36
303	HPV66	L2	GGGCTGATAGGATTTTACAA	TGG	F	119	138	40	69.71
304	HPV66	L2	GGATCAGGAGCCACACCCGA	GGG	R	575	594	65	68.57
305	HPV66	L2	GGTACTGGGTCTGGGTCGGG	TGG	F	178	197	70	57.7
306	HPV66	L2	GCTACCATGCAAACACGTAG	GGG	F	907	926	50	52.18
307	HPV66	L2	GGTGTAATATCCAACACAGC	AGG	R	962	981	45	51.24
308	HPV66	L2	GTAACAATAGAAGGATCTGT	AGG	R	1082	1101	35	51.1
309	HPV66	L2	GTAGAAGGCCTAGAGCCTAA	GGG	R	1157	1176	50	50.82
310	HPV66	L2	GTAACATCAGAAGGAGACTG	AGG	R	116	135	45	50.18
311	HPV66	L2	ATATCAGGACCTGAATAAAA	TGG	R	176	195	30	47.12
312	HPV66	L2	GTTTCCCAAACATTTCCCAA	AGG	R	200	219	40	46.91
313	HPV66	L2	GTTTGCGTCGTGTGGCACGG	TGG	R	1365	1384	65	46.15
314	HPV66	L2	AGGCTACCATGCAAACACGT	AGG	F	905	924	50	45.12
315	HPV66	L2	AGGATCAGGAGCCACACCCG	AGG	R	574	593	65	45.02
316	HPV66	L2	ACTGGAGGATCAATATATAG	TGG	R	896	915	35	44.35
317	HPV66	L2	ACTGACTCCACCACAATAGG	TGG	R	1109	1128	50	43.98
318	HPV66	L2	ACATCATGTGTAACATCAGA	AGG	R	107	126	35	41.67
319	HPV66	L2	GGCCAAGTACTGGGGCCTGT	AGG	R	146	165	65	40.86
320	HPV66	L2	GGTGTGCGTTTTAGTAGGCT	AGG	F	877	896	50	40.6
321	HPV66	L2	GGCTACCATGCAAACACGTA	GGG	F	906	925	50	40.33
322	HPV68	L2	GGGTGTTAAAGGCAACTGTG	GGG	R	136	155	50	64.19
323	HPV68	L2	GGTACTGGCTCTGGCACCGG	AGG	F	178	197	70	59.84
324	HPV68	L2	TGTGCCCTACTATATAAACG	TGG	R	719	738	40	58.74
325	HPV68	L2	GCGACCATGTTTACACGCCG	AGG	F	907	926	60	57.83
326	HPV68	L2	TTAGTAGTACTCCTATACCT	GGG	F	629	648	35	54.58
327	HPV68	L2	GGTATAGGAGTACTACTAAT	AGG	R	764	783	35	49.88
328	HPV68	L2	AGATGTAATTTCAAACCCAG	AGG	R	1015	1034	35	49.27
329	HPV68	L2	GGATCAGGAGCTATGTCAGC	AGG	R	590	609	55	47.14
330	HPV68	L2	GGTAGTATTAGTATATGTAG	TGG	R	226	245	30	45.86
331	HPV68	L2	ACAGGTTCAATAACCACAGG	TGG	R	1124	1143	45	44.92
332	HPV68	L2	TATCATATAAGTTATCCATA	GGG	R	357	376	20	44.54
333	HPV68	L2	GTATTAGGTTTTCCACCTAA	AGG	R	1172	1191	35	44.32
334	HPV68	L2	GGCAACTGTGGGGTTGTAGA	TGG	R	146	165	55	43.83
335	HPV68	L2	GGTTGTATCAATTGGAGTAG	AGG	R	115	134	40	43.01
336	HPV68	L2	TTGCAGACAAAATATTACAA	TGG	F	119	138	25	42.56
337	HPV73	L2	GGGGGATTGGGAATAGGTAG	TGG	F	169	188	55	68.8
338	HPV73	L2	GGAGGAGGTTGCAACACAGA	TGG	R	896	915	55	58.9
339	HPV73	L2	GTAGTGGGTCTGGATCAGGG	GGG	F	185	204	60	56.69
340	HPV73	L2	GGTGTTTGTGGTGTAACTAA	AGG	R	377	396	40	56.2
341	HPV73	L2	GGCACTATAGATGTAGGACC	AGG	R	1043	1062	50	53.53
342	HPV73	L2	ATAGTTTCTGTAGAAGGTAG	TGG	R	143	162	35	52.7
343	HPV73	L2	TTAGTAGTACGCCCATCCCA	GGG	F	647	666	50	50.42
344	HPV73	L2	GGTAGTGGGTCTGGATCAGG	GGG	F	184	203	60	50.38
345	HPV73	L2	GTAGTACGCCCATCCCAGGG	AGG	F	650	669	65	48.46
346	HPV73	L2	GTAGGCGTAGTTAAAAACGC	AGG	R	674	693	45	47.82
347	HPV73	L2	GTAACAACTGATGGTCGTAT	AGG	R	1136	1155	40	46.82
348	HPV73	L2	GGGGATTGGGAATAGGTAGT	GGG	F	170	189	50	43.87
349	HPV73	L2	GAAACAATAGAAGAATCTGA	AGG	R	1103	1122	30	43.86
350	HPV73	L2	GTTTTTCTAGAGGTTAAAGC	AGG	R	527	546	35	42.77
351	HPV73	L2	ATATCAAACCCTGAAGTAGA	AGG	R	1022	1041	35	42.1
352	HPV82	L2	GGTTTGGGTATATTTTTGGG	GGG	F	145	164	40	54.57
353	HPV82	L2	GGGTACATTCCTTTAGGTGG	TGG	F	208	227	50	53.11
354	HPV82	L2	TAGCTGATAAAATATTACAA	TGG	F	119	138	20	52.64
355	HPV82	L2	TTAACAATAGAAGGTTCAGT	AGG	R	1106	1125	30	52.62
356	HPV82	L2	AATGCCCTGCTATATAAACG	AGG	R	725	744	40	52.48
357	HPV82	L2	TTAGCAGTACACCCACCCCT	GGG	F	635	654	55	52.17
358	HPV82	L2	GGAGCAATATCTACAACACC	AGG	R	1163	1182	45	50.38
359	HPV82	L2	GCCACCATACGCACACGTAG	TGG	F	916	935	60	50.25
360	HPV82	L2	GGGGTGGGTGTACTGCTAAT	GGG	R	770	789	55	50.1
361	HPV82	L2	GGATCTGGTGCAACATCAGT	AGG	R	593	612	50	49.84
362	HPV82	L2	CCATCAGTACCAGTAAAGGT	AGG	R	1040	1059	45	48.25
363	HPV82	L2	GATAAAATATTACAATGGAG	TGG	F	124	143	25	46.62
364	HPV82	L2	CCTGCGCTGACATCTCGCAG	AGG	F	862	881	65	46.59
365	HPV82	L2	GCTACAGGTTCAATAATAAT	TGG	R	1130	1149	30	43.23
366	HPV82	L2	TGGTGGCTGCACGTGCACGG	CGG	F	2	21	70	42.9
367	HPV82	L2	CATCTCGCAGAGGTACAGTG	CGG	F	872	891	55	42.74
368	HPV82	L2	ACCTTAGGAATAACATCAGG	AGG	R	1319	1338	40	42.31
369	HPV82	L2	GAAAATGGAGAGCGAAGCAT	AGG	R	290	309	45	41.96
370	HPV82	L2	GGTGTAATGTCTAAAACCGC	AGG	R	986	1005	45	41.55
371	HPV82	L2	TTTACCTTAGGAATAACATC	AGG	R	1316	1335	30	41.02
372	HPV82	L2	ACATGTACTGTACCAGCGGA	AGG	R	965	984	50	40.95
373	HPV82	L2	GGCACCGGGTCTGGCACTGG	GGG	F	178	197	75	40.88
374	HPV82	L2	AGCATAAGATGAAGAAACAG	AGG	R	235	254	35	40.16
375	HPV82	L2	GGCCGTCCACCACCACCTAA	AGG	R	1184	1203	65	40.14