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Predicted structures of SARS-CoV-2 (2019-nCoV) proteins


No 2019-nCoV Protein Structure view GMQE QMEAN Identity Start End Structure download Plot download Template
1 NSP1 nsp1 0.13 -1.51 15.87 34 95 nsp1.pdb nsp1.pdf 2qai.1.B
2 NSP2 nsp2 0.03 -3.37 13.33 105 168 nsp2.pdb nsp2.pdf 4bts.45.A
3 Papain-like proteinase (NSP3) nsp3 0.05 -0.06 100 207 373 nsp3.pdb nsp3.pdf 6vxs.1.A
4 NSP4 nsp4 0.1 -1.55 61.36 411 499 nsp4.pdb nsp4.pdf 3vcb.1.A
5 3C-like ptoteinase (NSP5) 3CLPRO 0.99 0.45 100 1 301 3CLPRO.pdb 3CLPRO.pdf 6y2g.1.A
6 NSP6 nsp6 0.05 -2.73 10.26 245 284 nsp6.pdb nsp6.pdf 1d1o.1.A
7 NSP7 nsp7 0.98 -1.56 98.8 1 79 nsp7.pdb nsp7.pdf 5f22.1.A
8 NSP8 nsp8 0.65 0.43 97.47 77 191 nsp8.pdb nsp8.pdf 6nur.1.B
9 NSP9 nsp9 0.99 -0.51 100 5 113 nsp9.pdb nsp9.pdf 6w4b.1.A
10 NSP10 nsp10 0.98 -2.02 98.47 1 131 nsp10.pdb nsp10.pdf 5nfy.1.B
11 RdRp (NSP12) RdRp 0.86 -0.74 100 117 919 RdRp.pdb RdRp.pdf 6nur.1.A
12 Helicase (NSP13) H 0.74 -3.25 72.2 1 595 H.pdb H.pdf 5WWP.1.A
13 3'-5' Exonuclease (NSP14) nsp14 0.98 -3.12 94.88 3 525 nsp14.pdb nsp14.pdf 5nfy.1.A
14 Endo-RNAase (NSP15) nsp15 0.99 0.41 100 1 345 nsp15.pdb nsp15.pdf 6w01.1.A
15 2'-O-ribose methyltransferase nsp16 0.99 -1.19 100 2 298 nsp16.pdb nsp16.pdf 6w4h.1.A
16 S S 0.82 -2.82 99.92 15 1137 S.pdb S.pdf 6ACC.1.A
17 ORF3a orf3a 0.03 -1.96 35.71 129 158 orf3a.pdb orf3a.pdf 2m6n.1.A
18 E E 0.7 -3.27 91.38 8 65 E.pdb E.pdf 2mm4.1.A
19 M M 0.05 -2.42 24.24 173 205 M.pdb M.pdf 3h08.1.A
20 ORF6 orf6 0.35 -3.53 25 15 58 orf6.pdb orf6.pdf 5vyj.1.A
21 ORF7a orf7a 0.63 0.33 88.89 15 82 orf7a.pdb orf7a.pdf 1xak.1.A
22 ORF8 orf8 0.1 -2.73 13.51 54 94 orf8.pdb orf8.pdf 3nvq.1.A
23 N (ORF9) N 0.17 -2.02 95.76 247 364 N.pdb N.pdf 2JW8.1.A


Predicted structures of six different proteins namely RdRp, Helicase, Spike, Envelope, Membrane and Nucleocapsid of distinct coronaviruses i.e. SARS-CoV, MERS-CoV, HCoV-229E, HCoV-NL63, HCoV-OC43, and HCoV-HKU1


No CoVs Protein Structure view GMQE QMEAN Identity Start End Structure download Plot download Template
1 SARS-CoV RdRp SARS_Rdrp 0.86 -0.74 100.00% 117 919 SARS_Rdrp.pdb SARS_Rdrp.pdf 6nur.1.A
2 SARS-CoV E SARS_E 0.69 -3.59 94.83% 8 65 SARS_E.pdb SARS_E.pdf 2mm4.1.A
3 SARS-CoV M SARS_M 0.05 -2.85 20.59% 172 205 SARS_M.pdb SARS_M.pdf 3h08.1.A
4 SARS-CoV N SARS_N 0.18 -1.81 100 248 365 SARS_N.pdb SARS_N.pdf 2JW8.1.A
5 SARS-CoV S SARS_S 0.73 -3.63 76.47 18 1119 SARS_S.pdb SARS_S.pdf 6ACC.1.A
6 SARS-CoV H SARS_H 0.83 -1.68 72.2 1 590 SARS_H.pdb SARS_H.pdf 5WWP.1.A
7 MERS-CoV RdRp MERS_Rdrp 0.77 -1.06 72.14% 119 919 MERS_Rdrp.pdb MERS_Rdrp.pdf 6nur.1.A
8 MERS-CoV E MERS_E 0.21 -2.97 15.63% 7 38 MERS_E.pdb MERS_E.pdf 6b87.3.A
9 MERS-CoV M MERS_M 0.08 -2.15 6.52% 111 157 MERS_M.pdb MERS_M.pdf 4nv4.1.A
10 MERS-CoV N MERS_N 0.23 0.98 100 31 163 MERS_N.pdb MERS_N.pdf 4UD1.1.A
11 MERS-CoV S MERS_S 0.58 -0.56 99.54 18 743 MERS_S.pdb MERS_S.pdf 5W9H.1.L
12 MERS-CoV H MERS_H 0.98 -1.54 99.83 1 596 MERS_H.pdb MERS_H.pdf 5WWP.1.A
13 HCoV-229E RdRp 229E_Rdrp 0.75 -1.78 59.00% 111 913 229E_Rdrp.pdb 229E_Rdrp.pdf 6nur.1.A
14 HCoV-229E E 229E_E 0.49 -3.13 25.00% 9 64 229E_E.pdb 229E_E.pdf 2mm4.1.A
15 HCoV-229E M 229E_M 0.11 -4.13 23.08% 97 162 229E_M.pdb 229E_M.pdf 5c8s.1.A
16 HCoV-229E N 229E_N 0.24 -2.11 59.12 9 141 229E_N.pdb 229E_N.pdf 5N4K.1.A
17 HCoV-229E S 229E_S 0.79 -1.42 99.1 1 1043 229E_S.pdb 229E_S.pdf 5SZS.1.A
18 HCoV-229E H 229E_H 0.79 -2.11 61.91 1 597 229E_H.pdb 229E_H.pdf 5WWP.1.A
19 HCoV-HKU1 RdRp HKU1_Rdrp 0.76 -1.44 66.45% 117 915 HKU1_Rdrp.pdb HKU1_Rdrp.pdf 6nur.1.A
20 HCoV-HKU1 E HKU1_E 0.44 -2.89 25.49% 15 65 HKU1_E.pdb HKU1_E.pdf 2mm4.1.A
21 HCoV-HKU1 M HKU1_M 0.11 -2.28 21.88% 100 164 HKU1_M.pdb HKU1_M.pdf 5c8s.1.A
22 HCoV-HKU1 N HKU1_N 0.24 0.46 77.44 60 188 HKU1_N.pdb HKU1_N.pdf 3HD4.1.A
23 HCoV-HKU1 S HKU1_S 0.76 -1.38 65.16 14 1225 HKU1_S.pdb HKU1_S.pdf 6NZK.1.A
24 HCoV-HKU1 H HKU1_H 0.78 -2.2 66.67 1 595 HKU1_H.pdb HKU1_H.pdf 5WWP.1.A
25 HCoV-NL63 RdRp NL63_Rdrp 0.75 -1.66 59.57% 111 913 NL63_Rdrp.pdb NL63_Rdrp.pdf 6nur.1.A
26 HCoV-NL63 E NL63_E 0.47 -3.43 14.29% 9 64 NL63_E.pdb NL63_E.pdf 2mm4.1.A
27 HCoV-NL63 M NL63_M 0.08 -1.84 12.24% 110 159 NL63_M.pdb NL63_M.pdf 4nv4.1.A
28 HCoV-NL63 N NL63_N 0.28 -0.04 100 9 140 NL63_N.pdb NL63_N.pdf 5N4K.1.A
29 HCoV-NL63 S NL63_S 0.92 -0.63 100 23 1224 NL63_S.pdb NL63_S.pdf 6U7H.1.A
30 HCoV-NL63 H NL63_H 0.8 -1.98 62.46 1 595 NL63_H.pdb NL63_H.pdf 5WWP.1.A
31 HCoV-OC43 RdRp OC43_Rdrp 0.76 -1.52 66.74% 117 915 OC43_Rdrp.pdb OC43_Rdrp.pdf 6nur.1.A
32 HCoV-OC43 E OC43_E 0.37 -2.82 12.73% 16 76 OC43_E.pdb OC43_E.pdf 2mm4.1.A
33 HCoV-OC43 M OC43_M 0.1 -3.22 21.88% 104 168 OC43_M.pdb OC43_M.pdf 5c8s.2.A
34 HCoV-OC43 N OC43_N 0.2 -0.3 100 58 191 OC43_N.pdb OC43_N.pdf 4J3K.1.A
35 HCoV-OC43 S OC43_S 0.92 -0.82 99.68 15 1224 OC43_S.pdb OC43_S.pdf 6NZK.1.A
36 HCoV-OC43 H OC43_H 0.79 -2.07 68.52 1 591 OC43_H.pdb OC43_H.pdf 5WWP.1.A