CoronaVR
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Predicted highly potential CTL epitopes



No Protein Epitope sequence Start Stop Length Allele Conservancy
1 M LVGLMWLSY 88 96 10 HLA-A*01:01 88.89% (SARS-CoV)
2 M ATSRTLSYY 173 181 9 HLA-A*01:01 100% (SARS-CoV)
3 M FVLAAVYRI 65 73 9 HLA-A*02:01 100% (SARS-CoV)
4 M ATSRTLSYY 173 181 11 HLA-A*03:01 100% (SARS-CoV)
5 M TSRTLSYYK 174 182 10 HLA-A*03:01 100% (SARS-CoV)
6 M LWPVTLACF 57 65 10 HLA-A*24:02 100% (SARS-CoV)
7 M SYFIASFRL 95 103 9 HLA-A*24:02 88.89% (SARS-CoV)
8 M ATSRTLSYY 173 181 9 HLA-A*26:01 100% (SARS-CoV)
9 M SELVIGAVI 136 144 10 HLA-B*40:01 100% (SARS-CoV)
10 M KLIFLWLLW 50 58 10 HLA-B*58:01 88.89% (SARS-CoV)
11 M MACLVGLMW 85 93 9 HLA-B*58:01 88.89% (SARS-CoV)
12 M ATSRTLSYY 173 181 9 HLA-B*58:01 100% (SARS-CoV)
13 M ATSRTLSYY 173 181 9 HLA-B*15:01 100% (SARS-CoV)
14 E SVLLFLAFV 16 24 9 HLA-A*02:01 100% (SARS-CoV)
15 E FLAFVVFLL 20 28 10 HLA-A*02:01 100% (SARS-CoV)
16 E FLLVTLAIL 26 34 9 HLA-A*02:01 100% (SARS-CoV)
17 E YVYSRVKNL 57 65 9 HLA-B*08:01 100% (SARS-CoV)
18 E LLFLAFVVF 18 26 9 HLA-B*15:01 100% (SARS-CoV)
19 N SSPDDQIGY 79 87 9 HLA-A*01:01 88.89% (SARS-CoV)
20 N SPDDQIGYY 80 88 10 HLA-A*01:01 88.89% (SARS-CoV)
21 N DLSPRWYFY 104 112 9 HLA-A*01:01 88.89% (SARS-CoV)
22 N LSPRWYFYY 105 113 9 HLA-A*01:01 100% (SARS-CoV), 88.89% (MERS-CoV), 88.89% (OC43), 88.89% (HKU1)
23 N KTFPPTEPK 366 374 10 HLA-A*03:01 100% (SARS-CoV)
24 N DLSPRWYFY 104 112 10 HLA-A*26:01 88.89% (SARS-CoV)
25 N SPRWYFYYL 106 114 9 HLA-B*07:02 100% (SARS-CoV), 88.89% (OC43), 88.89% (HKU1)
26 N SPRWYFYYL 106 114 9 HLA-B*08:01 100% (SARS-CoV), 88.89% (OC43), 88.89% (HKU1)
27 N QRNAPRITF 9 17 10 HLA-B*27:05 88.89% (SARS-CoV)
28 N KMKDLSPRW 101 109 9 HLA-B*58:01 88.89% (SARS-CoV)
29 N LSPRWYFYY 105 113 10 HLA-B*58:01 100% (SARS-CoV), 88.89% (MERS-CoV), 88.89% (OC43), 88.89% (HKU1)
30 S STECSNLLL 756 764 9 HLA-A*01:01 88.89% (SARS-CoV)
31 S LLFNKVTLA 832 841 9 HLA-A*02:01 100% (SARS-CoV)
32 S VVFLHVTYV 1075 1083 9 HLA-A*02:01 100% (SARS-CoV)
33 S TLADAGFIK 838 846 9 HLA-A*03:01 88.89% (SARS-CoV)
34 S VLKGVKLHY 1282 1290 9 HLA-A*03:01 100% (SARS-CoV)
35 S PYRVVVLSF 514 522 9 HLA-A*24:02 100% (SARS-CoV)
36 S IAIPTNFTI 722 730 9 HLA-A*24:02 88.89% (SARS-CoV), 88.89% (HKU1)
37 S WTFGAGAAL 898 908 9 HLA-A*26:01 100% (SARS-CoV)
38 S VRFPNITNL 331 339 9 HLA-B*27:05 100% (SARS-CoV)
39 S YQPYRVVVL 512 520 9 HLA-B*39:01 100% (SARS-CoV)
40 S WTFGAGAAL 898 906 9 HLA-B*39:01 100% (SARS-CoV)
41 S AEIRASANL 1030 1038 9 HLA-B*40:01 100% (SARS-CoV)
42 S KEIDRLNEV 1197 1205 9 HLA-B*40:01 100% (SARS-CoV)
43 S IAIPTNFTI 722 730 9 HLA-B*58:01 88.89% (SARS-CoV), 88.89% (HKU1)
44 S FAMQMAYRF 910 918 9 HLA-B*58:01 100% (SARS-CoV)
45 S YIKWPWYIW 1226 1234 9 HLA-B*58:01 88.89% (SARS-CoV), 88.89% (MERS-CoV)
46 Leade KSFDLGDEL 143 151 9 HLA-B*58:01 88.89% (SARS-CoV)
47 NSP2 YTRYVDNNF 184 192 9 HLA-A*26:01 88.89% (SARS-CoV)
48 NSP2 YTRYVDNNF 184 192 9 HLA-B*58:01 88.89% (SARS-CoV)
49 NSP2 YTRYVDNNF 184 192 9 HLA-B*15:01 88.89% (SARS-CoV)
50 NSP2 TLSEQLDFI 217 225 9 HLA-A*02:01 88.89% (SARS-CoV)
51 NSP2 HEHEIAWYT 237 245 9 HLA-B*40:01 88.89% (SARS-CoV)
52 NSP2 YELQTPFEI 252 260 9 HLA-B*40:01 88.89% (SARS-CoV)
53 NSP2 FMGRIRSVY 300 308 9 HLA-A*01:01 100% (SARS-CoV)
54 NSP2 FMGRIRSVY 300 308 9 HLA-B*15:01 100% (SARS-CoV)
55 NSP2 EIAIILASF 478 486 9 HLA-A*26:01 88.89% (SARS-CoV)
56 NSP3 KTLQPVSEL 893 901 9 HLA-B*58:01 88.89% (SARS-CoV)
57 NSP3 KLTDNVYIK 1047 1055 9 HLA-A*03:01 88.89% (SARS-CoV)
58 NSP3 DIQLLKSAY 1143 1151 9 HLA-A*26:01 88.89% (SARS-CoV)
59 NSP3 QEILGTVSW 1384 1392 9 HLA-B*40:01 88.89% (SARS-CoV)
60 NSP3 ILGTVSWNL 1386 1394 9 HLA-A*02:01 100% (SARS-CoV)
61 NSP3 YMSALNHTK 1669 1677 9 HLA-A*03:01 100% (SARS-CoV)
62 NSP3 MSALNHTKK 1670 1678 9 HLA-A*03:01 100% (SARS-CoV)
63 NSP3 GEAANFCAL 1729 1737 9 HLA-B*39:01 88.89% (SARS-CoV)
64 NSP3 GEAANFCAL 1729 1737 9 HLA-B*40:01 88.89% (SARS-CoV)
65 NSP3 KRVLNVVCK 1769 1777 9 HLA-B*27:05 100% (SARS-CoV)
66 NSP3 VQQESPFVM 1823 1831 9 HLA-B*39:01 88.89% (SARS-CoV)
67 NSP3 HITSKETLY 1864 1872 9 HLA-A*01:01 88.89% (SARS-CoV)
68 NSP3 HITSKETLY 1864 1872 9 HLA-A*26:01 88.89% (SARS-CoV)
69 NSP3 TTIKPVTYK 1901 1909 9 HLA-A*03:01 88.89% (SARS-CoV)
70 NSP3 KPASRELKV 1976 1984 9 HLA-B*07:02 88.89% (SARS-CoV)
71 NSP3 KPVETSNSF 2045 2053 9 HLA-B*07:02 88.89% (SARS-CoV)
72 NSP3 HTDLMAAYV 2121 2129 9 HLA-A*01:01 88.89% (SARS-CoV)
73 NSP3 VQMAPISAM 2405 2413 9 HLA-B*39:01 88.89% (SARS-CoV)
74 NSP3 VQMAPISAM 2405 2413 9 HLA-B*15:01 88.89% (SARS-CoV)
75 NSP3 QMAPISAMV 2406 2414 9 HLA-A*02:01 88.89% (SARS-CoV)
76 NSP3 APISAMVRM 2408 2416 9 HLA-B*07:02 88.89% (SARS-CoV)
77 NSP3 SHFVNLDNL 2555 2563 9 HLA-B*39:01 100% (SARS-CoV)
78 NSP3 TPRDLGACI 2722 2730 9 HLA-B*07:02 100% (SARS-CoV)
79 NSP3/ MSLSEQLRK 2757 2765 9 HLA-A*03:01 100% (SARS-CoV)
80 NSP4 AAKKNNLPF 2771 2779 9 HLA-B*15:01 88.89% (SARS-CoV)
81 NSP4 CFANKHADF 2866 2874 9 HLA-A*24:02 88.89% (SARS-CoV)
82 NSP4 LLFLMSFTV 3127 3135 9 HLA-A*02:01 88.89% (SARS-CoV)
83 NSP4 LFLMSFTVL 3128 3136 9 HLA-B*08:01 88.89% (SARS-CoV)
84 NSP4 LMSFTVLCL 3130 3180 9 HLA-A*02:01 88.89% (SARS-CoV)
85 NSP4 SVIYLYLTF 3150 3158 9 HLA-A*24:02 88.89% (SARS-CoV)
86 NSP4 SVIYLYLTF 3150 3158 9 HLA-A*26:01 88.89% (SARS-CoV)
87 NSP4 SVIYLYLTF 3150 3158 9 HLA-B*15:01 88.89% (SARS-CoV)
88 NSP4 VIYLYLTFY 3151 3159 9 HLA-A*01:01 88.89% (SARS-CoV)
89 NSP4 VIYLYLTFY 3151 3159 9 HLA-A*03:01 88.89% (SARS-CoV)
90 NSP4 VSFLAHIQW 3164 3172 9 HLA-B*58:01 88.89% (SARS-CoV)
91 NSP4 FLLNKEMYL 3227 3236 9 HLA-B*08:01 100% (SARS-CoV)
92 NSP4 FLLNKEMYL 3228 3236 9 HLA-A*02:01 100% (SARS-CoV)
93 NSP4 RYLALYNKY 3251 3259 9 HLA-A*24:02 100% (SARS-CoV), 88.89% (OC43), 88.89% (HKU1)
94 NSP4 ALYNKYKYF 3254 3262 9 HLA-B*08:01 100% (SARS-CoV)
95 NSP4 ALYNKYKYF 3254 3262 9 HLA-B*15:01 100% (SARS-CoV)
96 3C-li CAMRPNFTI 3439 3447 9 HLA-B*58:01 88.89% (SARS-CoV)
97 3C-li GSVGFNIDY 3457 3465 9 HLA-A*01:01 100% (SARS-CoV)
98 3C-li VSFCYMHHM 3468 3476 9 HLA-B*58:01 100% (SARS-CoV)
99 3C-li FCYMHHMEL 3470 3478 9 HLA-B*08:01 100% (SARS-CoV), 88.89% (MERS-CoV)
100 3C-li SAQTGIAVL 3567 3575 9 HLA-B*39:01 100% (SARS-CoV)
101 NSP6 DEFTPFDVV 3602 3610 9 HLA-B*40:01 100% (SARS-CoV)
102 NSP6 QSTQWSLFF 3647 3655 9 HLA-A*01:01 100% (SARS-CoV)
103 NSP6 QSTQWSLFF 3647 3655 9 HLA-B*58:01 100% (SARS-CoV)
104 NSP6 STQWSLFFF 3648 3656 9 HLA-A*24:02 100% (SARS-CoV)
105 NSP6 TQWSLFFFL 3649 3657 9 HLA-A*02:01 88.89% (SARS-CoV)
106 NSP6 TQWSLFFFL 3649 3657 9 HLA-B*39:01 88.89% (SARS-CoV)
107 NSP6 TQWSLFFFL 3649 3657 9 HLA-B*40:01 88.89% (SARS-CoV)
108 NSP6 LYENAFLPF 3657 3665 9 HLA-A*24:02 88.89% (SARS-CoV)
109 NSP6 FVKHKHAFL 3679 3687 9 HLA-B*08:01 88.89% (SARS-CoV)
110 NSP6 FLLPSLATV 3691 3699 9 HLA-A*02:01 100% (SARS-CoV)
111 NSP6 MPASWVMRI 3707 3715 9 HLA-B*07:02 100% (SARS-CoV)
112 NSP6 VMYASAVVL 3735 3743 9 HLA-B*39:01 88.89% (SARS-CoV)
113 NSP6 MYASAVVLL 3736 3744 9 HLA-A*24:02 88.89% (SARS-CoV)
114 NSP6 ILMTARTVY 3745 3753 9 HLA-A*03:01 100% (SARS-CoV)
115 NSP6 ILMTARTVY 3745 3753 9 HLA-B*15:01 100% (SARS-CoV)
116 NSP6 LTLVYKVYY 3768 3776 9 HLA-A*01:01 88.89% (SARS-CoV)
117 NSP6 LTLVYKVYY 3768 3776 9 HLA-B*58:01 88.89% (SARS-CoV)
118 NSP6 LIISVTSNY 3789 3797 9 HLA-A*01:01 88.89% (SARS-CoV)
119 NSP6 LIISVTSNY 3789 3797 9 HLA-A*26:01 88.89% (SARS-CoV)
120 NSP6 LIISVTSNY 3789 3797 9 HLA-B*15:01 88.89% (SARS-CoV)
121 NSP6 MFLARGIVF 3805 3813 9 HLA-A*24:02 88.89% (SARS-CoV)
122 NSP6 CYFGLFCLL 3846 3854 9 HLA-A*24:02 100% (SARS-CoV)
123 NSP8 EMLDNRATL 3989 3997 9 HLA-B*08:01 100% (SARS-CoV)
124 NSP8 EMLDNRATL 3989 3997 9 HLA-B*39:01 100% (SARS-CoV)
125 NSP8 SLNVAKSEF 4039 4047 9 HLA-B*15:01 100% (SARS-CoV)
126 NSP8 KRAKVTSAM 4078 4086 9 HLA-B*39:01 100% (SARS-CoV)
127 NSP9 LQNNELSPV 4198 4206 9 HLA-A*02:01 100% (SARS-CoV)
128 NSP9 LSDLQDLKW 4244 4252 9 HLA-A*01:01 88.89% (SARS-CoV)
129 NSP9 LSDLQDLKW 4244 4252 9 HLA-B*58:01 88.89% (SARS-CoV)
130 NSP10 TELEPPCRF 4267 4275 9 HLA-B*40:01 100% (SARS-CoV), 88.89% (229E)
131 NSP10 NNLNRGMVL 4295 4303 9 HLA-B*08:01 100% (SARS-CoV)
132 RDRP RAFDIYNDK 4488 4496 9 HLA-A*03:01 88.89% (SARS-CoV)
133 RDRP GERVRQALL 4636 4644 9 HLA-B*40:01 88.89% (SARS-CoV), 88.89% (MERS-CoV)
134 RDRP ILHCANFNV 4766 4774 9 HLA-A*02:01 100% (SARS-CoV), 88.89% (MERS-CoV)
135 RDRP LHCANFNVL 4767 4775 9 HLA-B*39:01 100% (SARS-CoV), 100% (MERS-CoV)
136 RDRP STVFPPTSF 4777 4785 9 HLA-A*26:01 100% (SARS-CoV)
137 RDRP STVFPPTSF 4777 4785 9 HLA-B*15:01 100% (SARS-CoV)
138 RDRP NLHSSRLSF 4819 4827 9 HLA-B*08:01 100% (SARS-CoV)
139 RDRP NLHSSRLSF 4819 4827 9 HLA-B*15:01 100% (SARS-CoV)
140 RDRP SSRLSFKEL 4822 4830 9 HLA-B*08:01 100% (SARS-CoV)
141 RDRP SRLSFKELL 4823 4831 9 HLA-B*27:05 100% (SARS-CoV)
142 RDRP SRLSFKELL 4823 4831 9 HLA-B*39:01 100% (SARS-CoV)
143 RDRP LSFKELLVY 4836 4834 9 HLA-A*01:01 100% (SARS-CoV)
144 RDRP LSFKELLVY 4836 4834 9 HLA-A*03:01 100% (SARS-CoV)
145 RDRP LSFKELLVY 4836 4834 9 HLA-B*58:01 100% (SARS-CoV)
146 RDRP LSFKELLVY 4836 4834 9 HLA-B*15:01 100% (SARS-CoV)
147 RDRP LLDKRTTCF 4848 4856 9 HLA-A*01:01 100% (SARS-CoV)
148 RDRP LLDKRTTCF 4848 4856 9 HLA-B*08:01 100% (SARS-CoV)
149 RDRP FKEGSSVEL 4889 4897 9 HLA-B*39:01 100% (SARS-CoV), 88.89% (MERS-CoV)
150 RDRP RQLLFVVEV 4928 4936 9 HLA-A*02:01 100% (SARS-CoV)
151 RDRP FVVEVVDKY 4932 4940 9 HLA-A*01:01 100% (SARS-CoV)
152 RDRP FVVEVVDKY 4932 4940 9 HLA-A*26:01 100% (SARS-CoV)
153 RDRP KSAGFPFNK 4961 4969 9 HLA-A*03:01 100% (SARS-CoV), 88.89% (MERS-CoV), 88.89% (OC43), 88.89% (HKU1)
154 RDRP SYEDQDALF 4982 4990 9 HLA-A*24:02 100% (SARS-CoV), 88.89% (NL63)
155 RDRP FAYTKRNVI 4990 4998 9 HLA-B*08:01 100% (SARS-CoV), 88.89% (MERS-CoV)
156 RDRP IPTITQMNL 4998 5006 9 HLA-B*07:02 100% (SARS-CoV), 88.89% (MERS-CoV)
157 RDRP SAKNRARTV 5011 5019 9 HLA-B*08:01 100% (SARS-CoV), 100% (MERS-CoV), 100% (OC43), 100% (HKU1)
158 RDRP ARTVAGVSI 5016 5024 9 HLA-B*27:05 100% (SARS-CoV), 100% (MERS-CoV), 100% (OC43), 100% (HKU1)
159 RDRP MTNRQFHQK 5028 5036 9 HLA-A*03:01 100% (SARS-CoV), 88.89% (MERS-CoV), 88.89% (229E)
160 RDRP VVIGTSKFY 5050 5058 9 HLA-A*26:01 100% (SARS-CoV), 88.89% (NL63), 88/89% (OC43), 88.89% (HKU1), 88.89% (229E)
161 RDRP YSDVENPHL 5069 5077 9 HLA-A*01:01 88.89% (SARS-CoV)
162 RDRP MASLVLARK 5096 5104 9 HLA-A*03:01 100% (SARS-CoV)
163 RDRP AYLRKHFSM 5212 5220 9 HLA-A*24:02 100% (SARS-CoV), 88.89% (NL63)
164 RDRP YLRKHFSMM 5213 5221 9 HLA-A*26:01 100% (SARS-CoV), 100% (NL63), 88.89% (229E)
165 RDRP YLRKHFSMM 5213 5221 9 HLA-B*07:02 100% (SARS-CoV), 100% (NL63), 88.89% (229E)
166 RDRP YLRKHFSMM 5213 5221 9 HLA-B*08:01 100% (SARS-CoV), 100% (NL63), 88.89% (229E)
167 RDRP YLRKHFSMM 5213 5221 9 HLA-B*15:01 100% (SARS-CoV), 100% (NL63), 88.89% (229E)
168 RDRP VLYYQNNVF 5250 5258 9 HLA-B*15:01 100% (SARS-CoV), 100% (OC43), 100% (HKU1), 88.89% (NL63)
169 RDRP LYYQNNVFM 5252 5260 9 HLA-A*24:02 100% (SARS-CoV), 100% (MERS-CoV), 100% (OC43), 100% (HKU1), 100% (NL63), 88.89% (229E)
170 Helic DVFHLYLQY 5346 5354 9 HLA-A*01:01 100% (SARS-CoV)
171 Helic DVFHLYLQY 5346 5354 9 HLA-A*26:01 100% (SARS-CoV)
172 Helic HLYLQYIRK 5349 5357 9 HLA-A*03:01 100% (SARS-CoV)
173 Helic GHMLDMYSV 5364 5372 9 HLA-B*39:01 100% (SARS-CoV), 88.89% (MERS-CoV)
174 Helic HMLDMYSVM 5365 5373 9 HLA-B*39:01 100% (SARS-CoV), 88.89% (MERS-CoV)
175 Helic HMLDMYSVM 5365 5373 9 HLA-B*15:01 100% (SARS-CoV), 88.89% (MERS-CoV)
176 Helic WEPEFYEAM 5383 5391 9 HLA-B*40:01 100% (SARS-CoV)
177 Helic LQAVGACVL 5399 5407 9 HLA-B*39:01 100% (SARS-CoV)
178 Helic LQAVGACVL 5399 5407 9 HLA-B*40:01 100% (SARS-CoV)
179 Helic KLVLSVNPY 5440 5448 9 HLA-A*03:01 100% (SARS-CoV)
180 Helic KLVLSVNPY 5440 5448 9 HLA-B*15:01 100% (SARS-CoV)
181 Helic VTDVTQLYL 5457 5465 9 HLA-A*01:01 100% (SARS-CoV)
182 Helic LYLGGMSYY 5463 5471 9 HLA-A*24:02 100% (SARS-CoV), 100% (OC43), 100% (HKU1), 88.89% (MERS-CoV)
183 Helic REVLSDREL 5557 5565 9 HLA-B*40:01 100% (SARS-CoV)
184 Helic KVQIGEYTF 5594 5602 9 HLA-A*24:02 100% (SARS-CoV)
185 Helic KVQIGEYTF 5594 5602 9 HLA-B*58:01 100% (SARS-CoV)
186 Helic KLNVGDYFV 5621 5629 9 HLA-A*02:01 100% (SARS-CoV)
187 Helic TLVPQEHYV 5642 5650 9 HLA-A*02:01 100% (SARS-CoV)
188 Helic VGMQKYSTL 5675 5683 9 HLA-B*08:01 100% (SARS-CoV)
189 Helic SHFAIGLAL 5693 5701 9 HLA-B*39:01 100% (SARS-CoV), 88.89% (MERS-CoV)
190 Helic HFAIGLALY 5694 5702 9 HLA-A*26:01 100% (SARS-CoV), 88.89% (MERS-CoV)
191 Helic FAIGLALYY 5695 5703 9 HLA-A*01:01 100% (SARS-CoV), 88.89% (MERS-CoV)
192 Helic FAIGLALYY 5695 5703 9 HLA-A*26:01 100% (SARS-CoV), 88.89% (MERS-CoV)
193 Helic FAIGLALYY 5695 5703 9 HLA-B*58:01 100% (SARS-CoV), 88.89% (MERS-CoV)
194 Helic ALCEKALKY 5720 5728 9 HLA-A*03:01 100% (SARS-CoV), 88.89% (MERS-CoV)
195 Helic ISMATNYDL 5781 5789 9 HLA-B*58:01 100% (SARS-CoV)
196 Helic VVNARLRAK 5791 5799 9 HLA-A*03:01 100% (SARS-CoV)
197 Helic ARLRAKHYV 5794 5802 9 HLA-B*27:05 100% (SARS-CoV), 88.89% (OC43)
198 Helic RLRAKHYVY 5795 5803 9 HLA-A*03:01 100% (SARS-CoV), 88.89% (OC43)
199 Helic RLRAKHYVY 5795 5803 9 HLA-B*08:01 100% (SARS-CoV), 88.89% (OC43)
200 Helic RLRAKHYVY 5795 5803 9 HLA-B*15:01 100% (SARS-CoV), 88.89% (OC43)
201 Helic VYIGDPAQL 5802 5810 9 HLA-A*24:02 100% (SARS-CoV), 100% (OC43), 100% (HKU1), 88.89% (MERS-CoV)
202 Helic LEPEYFNSV 5823 5831 9 HLA-B*40:01 100% (SARS-CoV), 88.89% (MERS-CoV)
203 Helic RKAVFISPY 5914 5922 9 HLA-B*27:05 100% (SARS-CoV), 88.89%% (MERS-CoV), 88.89% (NL63), 88.89% (OC43), 88.89% (229E)
204 3'-5' SSQGSEYDY 5942 5950 9 HLA-A*01:01 100% (SARS-CoV), 100% (NL63), 88.89% (MERS-CoV), 88.89% (HKU1), 88.89% (229E)
205 3'-5' ITRAKVGIL 5973 5981 9 HLA-B*08:01 88.89% (SARS-CoV), 88.89% (OC43)
206 3'-5' YDKLQFTSL 5990 5998 9 HLA-B*08:01 100% (SARS-CoV)
207 3'-5' DTKFKTEGL 6040 6048 9 HLA-A*26:01 88.89% (SARS-CoV)
208 3'-5' RLISMMGFK 6063 6071 9 HLA-A*03:01 100% (SARS-CoV)
209 3'-5' LQLGFSTGV 6118 6126 9 HLA-A*02:01 100% (SARS-CoV), 100% (MERS-CoV), 88.89% (OC43), 88.89% (HKU1)
210 3'-5' MYKGLPWNV 6164 6172 9 HLA-A*24:02 100% (SARS-CoV)
211 3'-5' VVRIKIVQM 6172 6180 9 HLA-B*08:01 100% (SARS-CoV)
212 3'-5' VRIKIVQML 6173 6181 9 HLA-B*27:05 100% (SARS-CoV), 88.89% (HKU1)
213 3'-5' VRIKIVQML 6173 6181 9 HLA-B*39:01 100% (SARS-CoV), 88.89% (HKU1)
214 3'-5' NLSDRVVFV 6188 6196 9 HLA-A*02:01 88.89% (SARS-CoV)
215 3'-5' LSDRVVFVL 6189 6197 9 HLA-A*01:01 100% (SARS-CoV)
216 3'-5' HSIGFDYVY 6241 6249 9 HLA-A*01:01 88.89% (SARS-CoV)
217 3'-5' HSIGFDYVY 6241 6249 9 HLA-A*26:01 88.89% (SARS-CoV)
218 3'-5' HSIGFDYVY 6241 6249 9 HLA-B*58:01 88.89% (SARS-CoV)
219 3'-5' HSIGFDYVY 6241 6249 9 HLA-B*15:01 88.89% (SARS-CoV)
220 3'-5' GFDYVYNPF 6244 6252 9 HLA-A*24:02 100% (SARS-CoV), 88.89% (MERS-CoV)
221 3'-5' MIDVQQWGF 6254 6262 9 HLA-A*01:01 100% (SARS-CoV)
222 3'-5' QQWGFTGNL 6258 6266 9 HLA-B*39:01 100% (SARS-CoV)
223 3'-5' QQWGFTGNL 6258 6266 9 HLA-B*40:01 100% (SARS-CoV)
224 3'-5' KIEELFYSY 6376 6384 9 HLA-A*01:01 100% (SARS-CoV)
225 3'-5' YSYATHSDK 6382 6390 9 HLA-A*03:01 88.89% (SARS-CoV)
226 3'-5' FVNLKQLPF 6451 6459 9 HLA-A*26:01 88.89% (SARS-CoV)
227 3'-5' FVNLKQLPF 6451 6459 9 HLA-B*08:01 88.89% (SARS-CoV)
228 3'-5' FVNLKQLPF 6451 6460 9 HLA-B*15:01 88.89% (SARS-CoV)
229 Endo- NLKQLPFFY 6453 6461 9 HLA-A*01:01 100% (SARS-CoV)
230 Endo- MMISAGFSL 6516 6524 9 HLA-A*02:01 100% (SARS-CoV)
231 Endo- MMISAGFSL 6516 6524 9 HLA-B*08:01 100% (SARS-CoV)
232 Endo- MMISAGFSL 6516 6524 9 HLA-B*39:01 100% (SARS-CoV)
233 3'-5' MMISAGFSL 6516 6524 9 HLA-B*40:01 100% (SARS-CoV)
234 Endo- MMISAGFSL 6516 6524 9 HLA-B*15:01 100% (SARS-CoV)
235 Endo- MISAGFSLW 6517 6525 9 HLA-B*58:01 100% (SARS-CoV)
236 Endo- LENVAFNVV 6546 6554 9 HLA-B*40:01 88.89% (SARS-CoV), 88.89% (MERS-CoV), 88.89% (NL63), 88.89% (229E)
237 Endo- FENKTTLPV 6587 6595 9 HLA-B*39:01 100% (SARS-CoV), 88.89% (MERS-CoV)
238 Endo- FENKTTLPV 6587 6595 9 HLA-B*40:01 100% (SARS-CoV), 88.89% (MERS-CoV)
239 Endo- TTLPVNVAF 6591 6599 9 HLA-B*58:01 100% (SARS-CoV), 88.89% (NL63)
240 Endo- TTLPVNVAF 6592 6599 9 HLA-A*24:02 100% (SARS-CoV), 88.89% (NL63)
241 Endo- FEHIVYGDF 6779 6787 9 HLA-B*40:01 100% (SARS-CoV), 88.89% (MERS-CoV), 88.89% (OC43)
242 2'-O- PMDSTVKNY 6818 6826 9 HLA-A*01:01 100% (SARS-CoV)
243 2'-O- ALGGSVAIK 7059 7067 9 HLA-A*03:01 100% (SARS-CoV)
244 2'-O- GHFAWWTAF 7082 7090 9 HLA-B*39:01 88.89% (SARS-CoV)
245 2'-O- IQLSSYSLF 7135 7143 9 HLA-A*24:02 100% (SARS-CoV)
246 IQLSSYSLF 7135 7143 9 HLA-B*15:01 100% (SARS-CoV)
247 PLKLRGTAV 7149 7157 9 HLA-B*08:01 100% (SARS-CoV), 88.89% (OC43)
248 LRGTAVMSL 7152 7160 9 HLA-B*39:01 100% (SARS-CoV)
249 ORF3a IPIQASLPF 35 43 10 HLA-B*07:02 88.89% (SARS-CoV)
250 ORF3a APFLYLYAL 104 112 9 HLA-B*07:02 88.89% (SARS-CoV)
251 ORF3a LKKRWQLAL 65 73 10 HLA-B*08:01 88.89% (SARS-CoV)
252 ORF3a APFLYLYAL 104 112 12 HLA-B*08:01 88.89% (SARS-CoV)
253 ORF3a APFLYLYAL 104 112 11 HLA-B*39:01 88.89% (SARS-CoV)
254 ORF6 KVSIWNLDY 23 31 9 HLA-A*01:01 55.56% (SARS-CoV)
255 ORF6 KVSIWNLDY 23 31 10 HLA-A*03:01 55.56% (SARS-CoV)
256 ORF7a ILFLALITL 4 12 10 HLA-A*02:01 66.67% (SARS-CoV)
257 ORF7a TLCFTLKRK 112 120 10 HLA-A*03:01 77.78% (SARS-CoV)
258 ORF7a VFITLCFTL 109 117 10 HLA-A*24:02 66.67% (SARS-CoV)
259 ORF7a MKIILFLAL 1 9 9 HLA-B*39:01 88.89% (SARS-CoV)
260 ORF7a ALTCFSTQF 55 63 10 HLA-B*15:01 77.78% (SARS-CoV)
261 ORF7B YLCFLAFLL 10 18 9 HLA-A*02:01 100% (SARS-CoV)
262 ORF7B FLAFLLFLV 13 21 9 HLA-A*02:01 100% (SARS-CoV)
263 ORF7B MLIIFWFSL 24 32 9 HLA-A*02:01 100% (SARS-CoV)
264 ORF7B IIFWFSLEL 26 34 9 HLA-A*02:01 88.89% (SARS-CoV)
265 ORF7B MLIIFWFSL 24 32 9 HLA-B*08:01 100% (SARS-CoV)
266 ORF8 SFYEDFLEY 104 112 9 HLA-A*01:01 None
267 ORF8 IQYIDIGNY 72 80 9 HLA-B*15:01 None
268 ORF10 NVFAFPFTI 5 13 9 HLA-A*02:01
269 ORF10 AFPFTIYSL 8 16 9 HLA-A*24:02
270 ORF10 FPFTIYSLL 9 17 9 HLA-B*07:02
271 ORF10 FPFTIYSLL 9 17 9 HLA-B*08:01
272 ORF10 FPFTIYSLL 9 17 9 HLA-B*39:01
273 ORF10 IAQVDVVNF 27 35 10 HLA-B*58:01