RNAi screen analysis of viral host genes
Gene | vhfRNAi Accession | Vhf11990 |
Gene Symbol | RLBP1 | |
Gene Description | Retinaldehyde-binding protein 1 | |
Gene Name in Paper | RLBP1 | |
Group | Restriction Factor | |
Ensembl Gene ID | ENST00000268125 | |
UniProt ID | P12271 | |
Entrez Gene ID | 6017 | |
GO | View | |
Host | Organism | Homo sapiens |
Virus | Virus full name | West Nile virus |
Virus Abbreviation | WNV | |
Taxonomy | View | |
Results | Phenotype | Inhibited infection |
Hits Number* | Not mentioned | |
Confirmed Hits Number | 306 | |
Score | NA | |
Unit | NA | |
Methods | Assay Type | Cell-based |
BioModel Description | HeLa cells for screening a genome-scale pooled siRNA library of 21,121 human genes (a pool of four siRNAs per gene) | |
Confirmatory Screen Description | Confirmed hits were validated using pooled single siRNA and cytotoxicity assay | |
Primary Screen Description# | Any gene for which a minimum of two siRNAs reduced (HSF) or increased (HRF) the percentage of infected cells by >2-fold, and the fold change was >2 times the standard deviation (s.d.) of the percentage of control cells infected, was scored as a hit. | |
Note/Comment | Inhibited infection(283) | |
References | Pubmed ID | 18690214 |