Vhf11802 details

Gene vhfRNAi AccessionVhf11802
Gene SymbolABI1
Gene DescriptionAbl interactor 1
Gene Name in PaperABI1
GroupRestriction Factor
Ensembl Gene IDENSG00000136754 
UniProt IDQ8IZP0
Entrez Gene ID10006
GOView
Host OrganismHomo sapiens
Virus Virus full nameWest Nile virus
Virus AbbreviationWNV
TaxonomyView
Results PhenotypeInhibited infection
Hits Number*Not mentioned
Confirmed Hits Number306
ScoreNA
UnitNA
Methods Assay Type Cell-based
BioModel Description HeLa cells for screening a genome-scale pooled siRNA library of 21,121 human genes (a pool of four siRNAs per gene)
Confirmatory Screen DescriptionConfirmed hits were validated using pooled single siRNA and cytotoxicity assay
Primary Screen Description#Any gene for which a minimum of two siRNAs reduced (HSF) or increased (HRF) the percentage of infected cells by >2-fold, and the fold change was >2 times the standard deviation (s.d.) of the percentage of control cells infected, was scored as a hit.
Note/CommentInhibited infection(283)
References Pubmed ID18690214
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*Replicates that are beyond 2-3 standard deviation values from the mean (Sharma 2009)
#A strong signal/background ratio with low variation in the assay (Zhang 1999)