Vhf11033 details

Gene vhfRNAi AccessionVhf11033
Gene SymbolPLIN3
Gene DescriptionPerilipin-3
Gene Name in PaperPLIN3
GroupRestriction Factor
Ensembl Gene IDENST00000221957 
UniProt IDO60664
Entrez Gene ID10226
GOView
Host OrganismHomo sapiens
Virus Virus full nameVaccinia virus
Virus AbbreviationVACV
TaxonomyView
Results PhenotypeInhibited infection
Hits Number*266
Confirmed Hits Number188
ScoreNA
UnitNA
Methods Assay Type Cell-based
BioModel DescriptionHeLa cells for screening the 7,000 druggable genome library (QIAGEN), three nonoverlapping siRNAs against each gene, and repeated independently three times
Confirmatory Screen DescriptionsiRNAs from a different vendor (Ambion) were used to validate confirmed hits using three additional siRNAs in a secondary follow-up screen (repeated independently three times).
Primary Screen Description#A hit was defined as a gene with two or three of the three siRNAs reduced VACV infection relative to controls (i.e., for the majority, the median over the triplicates of at least two siRNAs had a median absolute deviation less than -1.5 over the whole sc
Note/CommentInhibited infection(188)
References Pubmed ID23084750
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*Replicates that are beyond 2-3 standard deviation values from the mean (Sharma 2009)
#A strong signal/background ratio with low variation in the assay (Zhang 1999)