Vhf10845 details

Gene vhfRNAi AccessionVhf10845
Gene SymbolLINC01270
Gene DescriptionNA
Gene Name in PaperLINC01270
GroupRestriction Factor
Ensembl Gene IDENSG00000203999 
UniProt IDNA
Entrez Gene ID284751
GOView
Host OrganismHomo sapiens
Virus Virus full nameSindbis virus
Virus AbbreviationSiV
TaxonomyView
Results PhenotypeInhibited infection
Hits Number*459
Confirmed Hits Number111
Score
UnitZ-score
Methods Assay Type Cell-based
BioModel DescriptionHuman U-2 OS cells for screening an arrayed library targeting 21,687 human genes in pools of 3 siRNAs per gene (Ambion Silencer human genome siRNA library V3)
Confirmatory Screen DescriptionConfirmed hits were validated by cell viability test and single round siRNA for inhibition of single-cycle SINV infection.
Primary Screen Description#Hits were defined as genes with z-scores and >=2/3 siRNAs inhibited or promoted SINV infection.
Note/CommentInhibited infection(57)
References Pubmed ID24367265
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*Replicates that are beyond 2-3 standard deviation values from the mean (Sharma 2009)
#A strong signal/background ratio with low variation in the assay (Zhang 1999)