RNAi screen analysis of viral host genes
Gene | vhfRNAi Accession | Vhf10843 |
Gene Symbol | LOC150051 | |
Gene Description | NA | |
Gene Name in Paper | LOC150051 | |
Group | Restriction Factor | |
Ensembl Gene ID | ENSG00000237594 | |
UniProt ID | NA | |
Entrez Gene ID | NA | |
GO | View | |
Host | Organism | Homo sapiens |
Virus | Virus full name | Sindbis virus |
Virus Abbreviation | SiV | |
Taxonomy | View | |
Results | Phenotype | Inhibited infection |
Hits Number* | 459 | |
Confirmed Hits Number | 111 | |
Score | 0.03 | |
Unit | Z-score | |
Methods | Assay Type | Cell-based |
BioModel Description | Human U-2 OS cells for screening an arrayed library targeting 21,687 human genes in pools of 3 siRNAs per gene (Ambion Silencer human genome siRNA library V3) | |
Confirmatory Screen Description | Confirmed hits were validated by cell viability test and single round siRNA for inhibition of single-cycle SINV infection. | |
Primary Screen Description# | Hits were defined as genes with z-scores and >=2/3 siRNAs inhibited or promoted SINV infection. | |
Note/Comment | Inhibited infection(57) | |
References | Pubmed ID | 24367265 |