RNAi screen analysis of viral host genes
Gene | vhfRNAi Accession | Vhf10764 |
Gene Symbol | KCNK6 | |
Gene Description | Potassium channel subfamily K member 6 | |
Gene Name in Paper | KCNK6 | |
Group | Host Factor | |
Ensembl Gene ID | ENST00000263372 | |
UniProt ID | Q9Y257 | |
Entrez Gene ID | 9424 | |
GO | View | |
Host | Organism | Homo sapiens |
Virus | Virus full name | Sendai virus |
Virus Abbreviation | SeV | |
Taxonomy | View | |
Results | Phenotype | Increased infection |
Hits Number* | 581 | |
Confirmed Hits Number | 59 | |
Score | 91.90% | |
Unit | Target gene inhibition | |
Methods | Assay Type | Cell-based |
BioModel Description | Embryonic kidney HEK 293T cells for screening lentiviral-based short hairpin RNA (shRNA) human library of ~15,000 human genes (3 shRNAs per gene). | |
Confirmatory Screen Description | Confirmed hits were validated using independent siRNA and qRT-PCR. | |
Primary Screen Description# | Assessing the transcriptional response at the SeV-induced interferon-b (IFNB1) promoter activity | |
Note/Comment | Increased infection(46) | |
References | Pubmed ID | 23785285 |