Vhf05644 details

Gene vhfRNAi AccessionVhf05644
Gene SymbolHNRNPA1P16
Gene DescriptionNA
Gene Name in PaperHNRNPA1P16
GroupRestriction Factor
Ensembl Gene IDENSG00000262333 
UniProt IDNA
Entrez Gene ID440396
GOView
Host OrganismHomo sapiens
Virus Virus full nameInfluenza A virus
Virus AbbreviationIAV
TaxonomyView
Results PhenotypeInhibited infection
Hits Number*19628-1936(624 after evidence analysis)
Confirmed Hits Number298
ScoreNA
UnitNA
Methods Assay Type Cell-based
BioModel DescriptionHuman lung epithelial (A549) cells for screening genome-wide libraries comprising 98,737 synthetic siRNAs targeting 19,628 unique human genes were arrayed in 384-well plates (7 ng per siRNA) such that each well contained either two (47,560 wells) or one (
Confirmatory Screen DescriptionsiRNAs for reconfirmation of 624 genes were individually rearrayed such that each well of a 384-well plate contained a single siRNA (7 ng). Virus replication was monitored by measuring luciferase activities at the indicated times.
Primary Screen Description#With a hit criterion of an activity score <0.4, 1936 genes were defined as primary hits for the A549 influenza virus screen.
Note/CommentInhibited infection_total(298)
References Pubmed ID20027183
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*Replicates that are beyond 2-3 standard deviation values from the mean (Sharma 2009)
#A strong signal/background ratio with low variation in the assay (Zhang 1999)