Vhf04735 details

Gene vhfRNAi AccessionVhf04735
Gene SymbolCOPG1
Gene DescriptionCoatomer subunit gamma-1
Gene Name in PaperCOPG1
GroupRestriction Factor
Ensembl Gene IDENSG00000181789 
UniProt IDQ9Y678
Entrez Gene ID22820
GOView
Host OrganismHomo sapiens
Virus Virus full nameInfluenza A virus
Virus AbbreviationIAV
TaxonomyView
Results PhenotypeInhibited infection
Hits Number*334
Confirmed Hits Number133
ScoreNA
UnitNA
Methods Assay Type Cell-based
BioModel DescriptionOsteosarcoma cells (U2OS) for screening Dharmacon siRNA library targeting 17,877 genes (four siRNAs per gene) in triplicate
Confirmatory Screen DescriptionFour unique siRNAs from each pool were rescreened separately. 260 out of 334 total pools with at least one siRNA scoring and 133 confirmed with two or more siRNAs (40%), reducing the probability of off-target effects.
Primary Screen Description#The percentage of HA-positive cells was less than 55% of the plate mean, and cell numbers were not less than 40% of the plate mean
Note/CommentInhibited infection(129)
References Pubmed ID20064371
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*Replicates that are beyond 2-3 standard deviation values from the mean (Sharma 2009)
#A strong signal/background ratio with low variation in the assay (Zhang 1999)