RNAi screen analysis of viral host genes
Gene | vhfRNAi Accession | Vhf04263 |
Gene Symbol | PI4KA | |
Gene Description | Phosphatidylinositol 4-kinase alpha | |
Gene Name in Paper | PI4KA | |
Group | Restriction Factor | |
Ensembl Gene ID | ENSG00000241973 | |
UniProt ID | P42356 | |
Entrez Gene ID | 5297 | |
GO | View | |
Host | Organism | Homo sapiens |
Virus | Virus full name | Human immunodeficiency virus 1 |
Virus Abbreviation | HIV-1 | |
Taxonomy | View | |
Results | Phenotype | Inhibited infection |
Hits Number* | 390 | |
Confirmed Hits Number | 232 | |
Score | NA | |
Unit | NA | |
Methods | Assay Type | Cell-based |
BioModel Description | HeLa P4/R5 cells (which contain ectopically expressed CD4 as well as an integrated HIV LTR-driven b-gal reporter) for screening a siRNA library targeting 19,709 genes with 22,329 pools (3 siRNAs per gene) | |
Confirmatory Screen Description | The 390 primary screen hits were then screened in silico against a database containing information on expression of over 11,700 genes in multiple tissues, including activated T cells and macrophage. Three hundred and eleven of the primary screen hits were | |
Primary Screen Description# | A hit was defined as siRNA that increased b-gal activity by at least 2-fold relative to negative controls. | |
Note/Comment | Inhibited infection(205) | |
References | Pubmed ID | 18976975 |