Vhf04108 details

Gene vhfRNAi AccessionVhf04108
Gene SymbolC5ORF45
Gene DescriptionUPF0544 protein C5orf45
Gene Name in PaperC5ORF45
GroupOthers
Ensembl Gene IDENSG00000161010 
UniProt IDQ6NTE8
Entrez Gene ID51149
GOView
Host OrganismHomo sapiens
Virus Virus full nameHuman immunodeficiency virus 1
Virus AbbreviationHIV-1
TaxonomyView
Results PhenotypeOthers
Hits Number*390
Confirmed Hits Number232
ScoreNA
UnitNA
Methods Assay Type Cell-based
BioModel DescriptionHeLa P4/R5 cells (which contain ectopically expressed CD4 as well as an integrated HIV LTR-driven b-gal reporter) for screening a siRNA library targeting 19,709 genes with 22,329 pools (3 siRNAs per gene)
Confirmatory Screen DescriptionTwo hundred and ninety-one of these siRNAs were selected for validation using independent siRNAs.
Primary Screen Description#A hit was defined as siRNA that increased b-gal activity by at least 2-fold relative to negative controls.
Note/CommentIncreased or inhibited infection(26)
References Pubmed ID18976975
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*Replicates that are beyond 2-3 standard deviation values from the mean (Sharma 2009)
#A strong signal/background ratio with low variation in the assay (Zhang 1999)