RNAi screen analysis of viral host genes
Gene | vhfRNAi Accession | Vhf04104 |
Gene Symbol | NUDT4 | |
Gene Description | Diphosphoinositol polyphosphate phosphohydrolase 2 | |
Gene Name in Paper | NUDT4 | |
Group | Others | |
Ensembl Gene ID | ENSG00000173598 | |
UniProt ID | Q9NZJ9 | |
Entrez Gene ID | 11163 | |
GO | View | |
Host | Organism | Homo sapiens |
Virus | Virus full name | Human immunodeficiency virus 1 |
Virus Abbreviation | HIV-1 | |
Taxonomy | View | |
Results | Phenotype | Others |
Hits Number* | 390 | |
Confirmed Hits Number | 232 | |
Score | NA | |
Unit | NA | |
Methods | Assay Type | Cell-based |
BioModel Description | HeLa P4/R5 cells (which contain ectopically expressed CD4 as well as an integrated HIV LTR-driven b-gal reporter) for screening a siRNA library targeting 19,709 genes with 22,329 pools (3 siRNAs per gene) | |
Confirmatory Screen Description | Two hundred and ninety-one of these siRNAs were selected for validation using independent siRNAs. | |
Primary Screen Description# | A hit was defined as siRNA that increased b-gal activity by at least 2-fold relative to negative controls. | |
Note/Comment | Increased or inhibited infection(26) | |
References | Pubmed ID | 18976975 |