Vhf04101 details

Gene vhfRNAi AccessionVhf04101
Gene SymbolMRE11A
Gene DescriptionDouble-strand break repair protein MRE11A
Gene Name in PaperMRE11A
GroupOthers
Ensembl Gene IDENSG00000020922 
UniProt IDP49959
Entrez Gene ID4361
GOView
Host OrganismHomo sapiens
Virus Virus full nameHuman immunodeficiency virus 1
Virus AbbreviationHIV-1
TaxonomyView
Results PhenotypeOthers
Hits Number*390
Confirmed Hits Number232
ScoreNA
UnitNA
Methods Assay Type Cell-based
BioModel DescriptionHeLa P4/R5 cells (which contain ectopically expressed CD4 as well as an integrated HIV LTR-driven b-gal reporter) for screening a siRNA library targeting 19,709 genes with 22,329 pools (3 siRNAs per gene)
Confirmatory Screen DescriptionTwo hundred and ninety-one of these siRNAs were selected for validation using independent siRNAs.
Primary Screen Description#A hit was defined as siRNA that increased b-gal activity by at least 2-fold relative to negative controls.
Note/CommentIncreased or inhibited infection(26)
References Pubmed ID18976975
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*Replicates that are beyond 2-3 standard deviation values from the mean (Sharma 2009)
#A strong signal/background ratio with low variation in the assay (Zhang 1999)