RNAi screen analysis of viral host genes
Gene | vhfRNAi Accession | Vhf02370 |
Gene Symbol | AIF1 | |
Gene Description | Allograft inflammatory factor 1 (AIF-1) (Ionized calcium-binding adapter molecule 1) (Protein G1) | |
Gene Name in Paper | AIF1 | |
Group | Restriction Factor | |
Ensembl Gene ID | ENST00000376049 ENST00000376059 ENST00000383473 ENST00000383474 ENST00000413349 ENST00000414149 ENST00000415830 ENST00000416422 ENST00000419376 ENST00000424944 ENST00000425748 ENST00000440907 | |
UniProt ID | P55008 | |
Entrez Gene ID | 199 | |
GO | View | |
Host | Organism | Homo sapiens |
Virus | Virus full name | Human immunodeficiency virus 1 |
Virus Abbreviation | HIV-1 | |
Taxonomy | View | |
Results | Phenotype | Down regulated |
Hits Number* | 3043 | |
Confirmed Hits Number | 1083 | |
Score | NA | |
Unit | NA | |
Methods | Assay Type | Cell-based |
BioModel Description | CD4+ T-cell subsets enriched in cells exhibiting Th17 (CCR4+CCR6+), Th1 (CXCR3+CCR6?), Th2 (CCR4+CCR6?), and Th1Th17 (CXCR3+CCR6+) | |
Confirmatory Screen Description | SYBR Green real-time RT-PCR | |
Primary Screen Description# | Differentially expressed genes based on p value < 0.05 and fold change (FC, cut-off 1.3) | |
Note/Comment | Identification of novel HIV-1 dependency factors | |
References | Pubmed ID | 26654242 |