Vhf02013 details

Gene vhfRNAi AccessionVhf02013
Gene SymbolABCG1
Gene DescriptionATP-binding cassette sub-family G member 1 (ATP-binding cassette transporter 8) (White protein homolog)
Gene Name in PaperABCG1
GroupHost Factor
Ensembl Gene IDENST00000343687 ENST00000347800 ENST00000361802 ENST00000398449 ENST00000398457 
UniProt IDP45844
Entrez Gene ID9619
GOView
Host OrganismHomo sapiens
Virus Virus full nameHuman immunodeficiency virus 1
Virus AbbreviationHIV-1
TaxonomyView
Results PhenotypeUp regulated
Hits Number*3043
Confirmed Hits Number1083
ScoreNA
UnitNA
Methods Assay Type Cell-based
BioModel DescriptionCD4+ T-cell subsets enriched in cells exhibiting Th17 (CCR4+CCR6+), Th1 (CXCR3+CCR6?), Th2 (CCR4+CCR6?), and Th1Th17 (CXCR3+CCR6+)
Confirmatory Screen DescriptionSYBR Green real-time RT-PCR 
Primary Screen Description#Differentially expressed genes based on p value < 0.05 and fold change (FC, cut-off 1.3)
Note/CommentIdentification of novel HIV-1 dependency factors
References Pubmed ID26654242
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*Replicates that are beyond 2-3 standard deviation values from the mean (Sharma 2009)
#A strong signal/background ratio with low variation in the assay (Zhang 1999)