RNAi screen analysis of viral host genes
Gene | vhfRNAi Accession | Vhf01528 |
Gene Symbol | LRIG3 | |
Gene Description | Leucine-rich repeats and immunoglobulin-like domains protein 3 | |
Gene Name in Paper | LRIG3 | |
Group | Restriction Factor | |
Ensembl Gene ID | ENST00000320743 | |
UniProt ID | Q6UXM1 | |
Entrez Gene ID | 121227 | |
GO | View | |
Host | Organism | Homo sapiens |
Virus | Virus full name | Dengue virus 2 |
Virus Abbreviation | DEN-2 | |
Taxonomy | View | |
Results | Phenotype | Inhibited infection |
Hits Number* | 116 | |
Confirmed Hits Number | 40 | |
Score | 1.7 | |
Unit | Fold Change | |
Methods | Assay Type | Cell-based |
BioModel Description | HuH-7 cells using two siRNAs (Qiagen) | |
Confirmatory Screen Description | Validation was done by siRNA in HuH-7 cells with results of 1.5 fold inhibition with a p-value <0.05 as confirmed hits. All confirmed hits are human genes | |
Primary Screen Description# | 1.5 fold inhibition with a p-value <0.05 | |
Note/Comment | Inhibited infection(40). The 116 genes are from Drosophila melanogaster, which have 82 readily recognizable human homologues. | |
References | Pubmed ID | 19396146 |