ZikaVR

Dot plot analysis to compare two genomes

This tool allows user to visualize similar regions between two genome sequences in two-dimensional plots. Here we are implementing Gepard V1.30 program to provide easy to use web tool with maximum functionality. User can also download result plot using download option. For more information click Help.

::GenoPlotter::
Enter a genome sequence (FASTA (.fasta/.fa/.fna) format) below:
       Download Example Genome 1          Or load it from disk

Enter a genome sequence (FASTA (.fasta/.fa/.fna) format) below:
       Download Example Genome 2          Or load it from disk


Substitution matrix:

Word length :	Maximum width :
Window size :	Maximum height :

::Optional Parameters::
Coordinate parameters to plot and use partial sequences

Genome 1 Start :	Genome 1 End :
Genome 2 Start :	Genome 2 End :