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Dot plot analysis to compare two genomes


This tool allows user to visualize similar regions between two genome sequences in two-dimensional plots. Here we are implementing Gepard V1.30 program to provide easy to use web tool with maximum functionality. User can also download result plot using download option. For more information click Help.

::GenoPlotter::
Enter a genome sequence (FASTA (.fasta/.fa/.fna) format) below:         
       Download Example Genome 1          Or load it from disk   

Enter a genome sequence (FASTA (.fasta/.fa/.fna) format) below:         
       Download Example Genome 2          Or load it from disk   
                   

Substitution matrix:            
Word length  :          Maximum width  :         
Window size  :         Maximum height :        

::Optional Parameters::
 Coordinate parameters to plot and use partial sequences
  
Genome 1 Start  :          Genome 1 End  :         
Genome 2 Start  :          Genome 2 End  :