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ZIKV-MR1-5p details

ZIKVmiR IDZIKV-MR1-5p
miRNA nameMR1-5p
Mature sequenceCGAUGCUGGUGUCUGCGCCACG
Length22
Location on ZIKV genome407-429
miRNA Position on hairpin50
GC content (%)68.18
Hairpin (pre-miRNA) sequenceUCUAGUGAUCUCUGCUGCCAUGGCUGUAGUCAGCAGGAGGCCAAUGAUUCCGAUGCUGGUGUCUGCGCCACGUCUCUUCCUCUCUUUCCUAGCAUUGAUUAUUCUCAACAUGGCAGCAAGAUCUUUCUUGA
Hairpin (pre-miRNA) length131
pre-miRNA location on ZIKV genome357 - 487
VMiR score133.1
Rank8
OrientationReverse
Secondary structure (Minimum free energy)