aBiofilm Interaction analysis

Using CYTOSCAPE software, we have developed interaction map of biofilm stages of ESKAPE pathogens as well as top ten organisms targeted by antibiofilm agent with various inhibition efficacy. For exploring cytoscape, visit help page



  1. Acinetobacter baumannii (ESKAPE pathogen)

  2. Klebsiella pneumoniae (ESKAPE pathogen)

  3. Enterococcus faecium (ESKAPE pathogen)

  4. Staphylococcus aureus (ESKAPE pathogen)

  5. Pseudomonas aeruginosa (ESKAPE pathogen)

  6. Enterobacter spp. (ESKAPE pathogen)

  7. Candida albicans (Non-ESKAPE pathogen)

  8. Escherichia coli (Non-ESKAPE pathogen)

  9. Staphylococcus epidermidis (Non-ESKAPE pathogen)

  10. Streptococcus mutans (Non-ESKAPE pathogen)

  11. Staphylococcus epidermis (Non-ESKAPE pathogen)

  12. Listeria monocytogenes (Non-ESKAPE pathogen)

  13. Streptococcus pyogenes (Non-ESKAPE pathogen)

  14. Enterococcus faecalis (Non-ESKAPE pathogen)



Note: The domains of cytoscape map is represented in four different colors i.e. blue, green, pink and dark yellow for anti-biofilm agents, targeted micro-organism, stage of biofilm targeted, and efficiency ot the anti-biofilm agent to target biofilm respectively. We are providing general view of map, which can be changed by the user through the options provided in the window like visual style and layout.






Contact

Dr. Manoj Kumar
Senior Scientist
Bioinformatics Centre,
CSIR-Institute of Microbial Technology,
Sector 39A, Chandigarh,
India - 160036
Phone: +91-172-6665453
Fax: +91-172-2690585, 2690632
Website: http://bioinfo.imtech.res.in/manojk/ E-mail: manojk@imtech.res.in

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