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NiV-LP9 details

NiVmiR IDNiV-LP9
miRNA nameLP9
Hairpin (pre-miRNA) sequenceUCUGUACAUGUUAAAUAAUCUUGAGAUUGGGAAUCCAGGGGUGUAUGCUAUCUUGGAUACUAAUAGUCCGUCCUCCAUCAUAACAUUUAUCGCGAUAGAUAUUAGAUGGGAAUGUUCUACUAGUAUCUCCUCUACAUUUUUGUCAAUCCCAGACUCCAUGUCAGA
Hairpin (pre-miRNA) length165
pre-miRNA location on ZIKV genome17226-17390
Genomic region of Nipah virusL
VMiR score171.6
Rank6
Mature (5p) sequenceCUUGAGAUUGGGAAUCCAGGGG
Location on genome17244-17266
GC content (%)54.55
Mature (3p) sequenceAUUAGAUGGGAAUGUUCUACUA
Location on genome17325-17347
GC content (%)31.82