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NiV-LP5 details

NiVmiR IDNiV-LP5
miRNA nameLP5
Hairpin (pre-miRNA) sequenceGCUAUCACUCAAAAAGUUCAUCCUAAUCUUCCCUACAAGGUAAAGAAAGAGAUCUGUGCAAAGCAAGCUCAGCUUUAUUUUGAAAGGUUAAGGAUGAACUUAAGAGCCCUCGGC
Hairpin (pre-miRNA) length114
pre-miRNA location on ZIKV genome13920-14033
Genomic region of Nipah virusL
VMiR score180.8
Rank3
Mature (5p) sequenceAAAGUUCAUCCUAAUCUUCCCU
Location on genome13931-13953
GC content (%)36.36
Mature (3p) sequenceUUGAAAGGUUAAGGAUGAACUU
Location on genome13998-14020
GC content (%)31.82