Type/paste query sequence in FASTA format
 (Please submit one sequence at a time. The program will ignore all non-standard characters)
 

or Upload your sequence  
 
E-value       Show alignment of top    10 25 50 100   matches

Advance parameters

Weight matrix    BLOSUM80BLOSUM62BLOSUM50BLOSUM45BLOSUM90PAM250PAM70PAM30 Word size      Gap cost   Opening: 9 Extension: 2Opening : 8 Extension: 2Opening : 7 Extension: 2Opening : 12 Extension: 1Opening : 11 Extension: 1Opening : 10 Extension: 1