SMEpred
siMEPred : Modified siRNA Efficiency Prediction algorithm

siMEPred is an algorithm that predicts the efficacy of chemically modified siRNA's on multiple locations with different chemical modifications (List of chemical Modifications) on normal siRNA sequences. User can custom generate any number of permutations and combinations of chemical modifications in unmodified siRNA sequences using  MultiModGen. User can also download results by clicking download option. For more information please click HELP-FAQS.

For One letter code of Chemical modifications click here (dropdown option)                  

::siMEpred::
         Enter a siRNA sequence (one sequence in one line, sense-antisense) below:          
        
         Or load it from disk                       


         SVM based prediction model used:   

                   MODEL_A: Mono Nucleotide Composition (MNC)
                   MODEL_B: Hybrid 2-MNC+Bin-As-5` 13
                   MODEL_C: Hybrid 3-MNC+Bin-As-seed-3` 8
                   All (A+B+C)